Gene EcolC_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1896 
Symbol 
ID6064713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2096885 
End bp2097235 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content50% 
IMG OID641601309 
ProductPTS system N,N'-diacetylchitobiose-specific transporter subunit IIA 
Protein accessionYP_001724871 
Protein GI170019917 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1447] Phosphotransferase system cellobiose-specific component IIA 
TIGRFAM ID[TIGR00823] phosphotransferase system enzyme II, lactose-specific, factor III 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.398825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.353636 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGATC TCGACAACAT TCCCGATACG CAAACGGAAG CTGAAGAGCT GGAAGAAGTG 
GTGATGGGGC TTATCATCAA CTCCGGACAA GCGCGCAGCC TGGCGTATGC GGCACTGAAA
CAGGCGAAGC AGGGCGATTT TGCCGCAGCA AAAGCCATGA TGGATCAGTC ACGGCTGGCA
TTGAATGAAG CGCATCTGGT ACAGACGAAA CTGATTGAAG GCGATGCGGG CGAAGGTAAG
ATGAAAGTGA GTCTGGTGCT GGTCCACGCT CAGGATCATT TAATGACGTC CATGCTTGCG
CGTGAACTGA TTACTGAATT AATTGAGCTT CATGAAAAAC TGAAGGCATA A
 
Protein sequence
MMDLDNIPDT QTEAEELEEV VMGLIINSGQ ARSLAYAALK QAKQGDFAAA KAMMDQSRLA 
LNEAHLVQTK LIEGDAGEGK MKVSLVLVHA QDHLMTSMLA RELITELIEL HEKLKA