Gene EcolC_1883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1883 
Symbol 
ID6065201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2083456 
End bp2084274 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content53% 
IMG OID641601296 
Productexonuclease III 
Protein accessionYP_001724858 
Protein GI170019904 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00382686 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAGCGA CTATGAAATT TGTCTCTTTT AATATCAACG GCCTGCGCGC CAGACCTCAC 
CAGCTTGAAG CCATCGTCGA AAAGCACCAA CCGGATGTGA TTGGCCTGCA GGAGACAAAA
GTTCATGACG ATATGTTTCC GCTCGAAGAG GTGGCGAAGC TCGGCTACAA CGTGTTTTAT
CACGGGCAGA AAGGCCATTA TGGCGTGGCG CTGCTGACCA AAGAGACGCC GATTGCCGTA
CGTCGCGGCT TTCCCGGTGA CGACGAAGAG GCGCAGCGGC GGATTATTAT GGCGGAAATC
CCCTCACTGC TGGGTAATGT CACCGTGATC AACGGTTACT TCCCGCAGGG TGAAAGCCGC
GACCATCCGA TAAAATTCCC GGCAAAAGCG CAGTTTTATC AGAATCTGCA AAACTACCTG
GAAACCGAAC TCAAACGTGA TAATCCGGTA CTGATTATGG GCGATATGAA TATCAGCCCT
ACAGATCTGG ATATCGGCAT TGGCGAAGAA AACCGTAAGC GCTGGCTGCG TACCGGTAAA
TGCTCTTTCC TGCCGGAAGA GCGCGAATGG ATGGACAGGC TGATGAGCTG GGGGTTGGTC
GATACCTTCC GCCATGCTAA TCCGCAAACA GCAGATCGTT TCTCATGGTT TGATTACCGC
TCAAAAGGTT TTGACGATAA CCGTGGTCTG CGCATCGACC TGCTGCTCGC CAGCCAACCG
CTGGCAGAAT GTTGCGTAGA AACCGGCATC GACTATGAAA TTCGCAGCAT GGAAAAACCG
TCCGATCACG CCCCCGTCTG GGCGACCTTC CGCCGCTAA
 
Protein sequence
MAATMKFVSF NINGLRARPH QLEAIVEKHQ PDVIGLQETK VHDDMFPLEE VAKLGYNVFY 
HGQKGHYGVA LLTKETPIAV RRGFPGDDEE AQRRIIMAEI PSLLGNVTVI NGYFPQGESR
DHPIKFPAKA QFYQNLQNYL ETELKRDNPV LIMGDMNISP TDLDIGIGEE NRKRWLRTGK
CSFLPEEREW MDRLMSWGLV DTFRHANPQT ADRFSWFDYR SKGFDDNRGL RIDLLLASQP
LAECCVETGI DYEIRSMEKP SDHAPVWATF RR