| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1879 |
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| Symbol | |
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| ID | 6067353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 2080627 |
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| End bp | 2081175 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641601292 |
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| Product | carboxymuconolactone decarboxylase |
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| Protein accession | YP_001724854 |
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| Protein GI | 170019900 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00116324 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGGTTTAC CGCCGCTTAG CAAAATTCCT TTAATTTTAC GTCCACAGGC GTGGCTGCAT
CGTCGCCATT ACGGCGAGGT GCTAAGCCCC ATTCGCTGGT GGGGGCGGAT CCCGTTTATC
TTTTATCTGG TGTCGATGTT TGTTGGCTGG CTGGAGCGCA AACGCTCACC GCTCGATCCG
GTAGTACGAT CGCTTGTCAG CGCGCGCATT GCGCAAATGT GCCTGTGTGA GTTTTGTGTG
GATATCACCA GTATGAAAGT CGCCGAGCGC ACCGGCAGCA GCGATAAACT GCTGGCAGTG
GCTGACTGGC GGCAAAGCCC GCTCTTTAGC GATGAAGAAC GGCTGGCGCT GGAGTACGCC
GAAGCCGCAA GCGTAACGCC GCCAACGGTC GATGATGCCC TGCGTACCCG ACTGGCTGCG
CATTTTGACG CTCAGGCGCT CACCGAACTG ACGGCATTGA TCGGCCTGCA AAATCTGTCA
GCCCGTTTTA ATTCTGCCAT GGACATTCCC GCTCAGGGGC TGTGCCGTAT TCCTGAAAAA
CGTTCTTAA
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| Protein sequence | MGLPPLSKIP LILRPQAWLH RRHYGEVLSP IRWWGRIPFI FYLVSMFVGW LERKRSPLDP
VVRSLVSARI AQMCLCEFCV DITSMKVAER TGSSDKLLAV ADWRQSPLFS DEERLALEYA
EAASVTPPTV DDALRTRLAA HFDAQALTEL TALIGLQNLS ARFNSAMDIP AQGLCRIPEK
RS
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