Gene EcolC_1873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1873 
Symbol 
ID6064370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2074793 
End bp2075200 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content55% 
IMG OID641601286 
Productpyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase 
Protein accessionYP_001724848 
Protein GI170019894 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID[TIGR00586] mutator mutT protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.440168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000083786 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATGA TTGAAGTTGT TGCCGCCATC ATTGAACGTG ATGGCAAAAT TTTACTCGCG 
CAACGCCCCG CCCAGAGCGA TCAGGCGGGA TTATGGGAGT TTGCCGGTGG TAAAGTCGAG
CCGGATGAAA GTCAGCGGCA GGCGCTGGTG CGTGAGTTAC GCGAAGAACT GGGCATCGAA
GCAACTGTGG GTGAATATGT TGCCAGCCAT CAGCGAGAAG TTTCGGGGCG GATTATCCAT
CTTCATGCCT GGCACGTACC CGACTTCCAC GGGACGTTAC AGGCACATGA ACATCAGGCG
CTGGTCTGGT GCTCACCTGA AGAGGCGCTG CAATATCCGC TGGCCCCTGC TGACATTCCA
TTATTAGAGG CGTTTATGGC TTTACGCGCC GCCAGACCAG CGGATTAG
 
Protein sequence
MKMIEVVAAI IERDGKILLA QRPAQSDQAG LWEFAGGKVE PDESQRQALV RELREELGIE 
ATVGEYVASH QREVSGRIIH LHAWHVPDFH GTLQAHEHQA LVWCSPEEAL QYPLAPADIP
LLEAFMALRA ARPAD