| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1866 |
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| Symbol | |
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| ID | 6066463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 2065997 |
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| End bp | 2067853 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641601279 |
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| Product | protease 4 |
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| Protein accession | YP_001724841 |
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| Protein GI | 170019887 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.235233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000640053 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCGAACCC TTTGGCGATT TATTGCCGGA TTTTTTAAAT GGACGTGGCG TCTGCTGAAT
TTCGTCCGTG AAATGGTACT TAACCTGTTC TTTATTTTCC TCGTACTGGT TGGTGTGGGG
ATTTGGATGC AGGTCAGTGG TGGTGATTCG AAAGAAACGG CCAGTCGTGG CGCACTGCTG
CTGGACATTT CTGGTGTGAT CGTCGATAAA CCCGACAGTT CTCAGCGGTT TAGTAAATTA
AGCCGCCAGC TGCTTGGTGC CAGTTCCGAT CGTCTGCAGG AAAACTCACT GTTTGATATC
GTCAACACTA TTCGCCAGGC GAAGGACGAC CGCAATATCA CCGGTATTGT GATGGATCTG
AAAAACTTCG CAGGCGGCGA CCAACCGTCT ATGCAGTACA TCGGCAAAGC TCTGAAAGAG
TTTCGTGACA GCGGGAAACC GGTTTATGCC GTTGGCGAGA ACTACAGCCA GGGGCAATAT
TATCTCGCCA GTTTCGCCAA TAAAATTTGG CTGTCTCCGC AAGGCGTGGT TGATCTGCAC
GGCTTTGCCA CCAACGGTCT GTACTACAAA TCGTTGCTGG ATAAGCTGAA AGTTTCCACC
CATGTGTTCC GCGTGGGTAC GTATAAATCT GCCGTTGAAC CGTTTATTCG TGATGATATG
TCACCGGCAG CCCGCGAAGC TGACAGCCGC TGGATTGGTG AGCTGTGGCA AAACTATCTG
AATACTGTTG CCGCTAACCG GCAGATCCCT GCTGAGCAGG TATTCCCTGG CGCGCAAGGG
TTGCTTGAGG GTTTAACCAA AACCGGTGGC GATACCGCGA AATATGCACT GGAAAACAAG
CTGGTCGATG CACTGGCATC GAGTGCGGAA ATCGAAAAAG CACTGACCAA AGAATTCGGC
TGGAGTAAGA CTGATAAAAA TTATCGCGCC ATCAGTTATT ACGATTACGC ATTGAAAACG
CCGGCAGATA CCGGTGACAG CATCGGTGTC GTCTTTGCTA ATGGCGCAAT TATGGATGGC
GAGGAAACTC AGGGGAATGT TGGCGGTGAT ACCACTGCGG CACAAATCCG CGACGCTCGC
CTTGACCCGA AAGTGAAAGC GATTGTCCTG CGTGTTAATA GCCCAGGCGG CAGCGTTACC
GCGTCTGAAG TGATTCGCGC TGAACTGGCA GCAGCCCGGG CAGCGGGTAA GCCTGTGGTT
GTATCGATGG GCGGCATGGC GGCATCTGGT GGTTACTGGA TTTCCACGCC AGCTAATTAC
ATTGTGGCTA ACCCCAGCAC CCTGACCGGT TCTATCGGTA TCTTCGGCGT GATCACCACC
GTAGAAAATA GTCTGGATTC GATTGGTGTT CATACTGATG GTGTCTCAAC TTCACCGCTG
GCGGATGTTT CTATCACCAG GGCACTGCCG CCGGAAGCGC AGCAGATGAT GCAATTAAGC
ATTGAGAATG GCTATAAACG CTTTATCACG CTGGTTGCTG ATGCGCGTCA TTCGACGCCG
GAGCAAATTG ATAAAATCGC CCAGGGCCAC GTCTGGACCG GTCAGGATGC AAAAGCTAAC
GGGCTGGTCG ATAGTCTCGG GGATTTCGAT GATGCGGTTG CCAAAGCAGC AGAGCTCGCA
AAAGTGAAAC AGTGGCATCT GGAATACTAC GTTGATGAAC CGACCTTCTT CGACAAAGTG
ATGGACAACA TGTCTGGTTC TGTCCGGGCA ATGTTGCCAG ATGCGTTCCA GGCCATGTTA
CCTGCACCGC TTGCCTCGGT AGCCTCTACC GTTAAAAGTG AAAGCGACAA GCTGGCCGCG
TTTAACGACC CACAAAACCG TTATGCGTTT TGCCTGACCT GCGCCAACGT GCGTTAA
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| Protein sequence | MRTLWRFIAG FFKWTWRLLN FVREMVLNLF FIFLVLVGVG IWMQVSGGDS KETASRGALL
LDISGVIVDK PDSSQRFSKL SRQLLGASSD RLQENSLFDI VNTIRQAKDD RNITGIVMDL
KNFAGGDQPS MQYIGKALKE FRDSGKPVYA VGENYSQGQY YLASFANKIW LSPQGVVDLH
GFATNGLYYK SLLDKLKVST HVFRVGTYKS AVEPFIRDDM SPAAREADSR WIGELWQNYL
NTVAANRQIP AEQVFPGAQG LLEGLTKTGG DTAKYALENK LVDALASSAE IEKALTKEFG
WSKTDKNYRA ISYYDYALKT PADTGDSIGV VFANGAIMDG EETQGNVGGD TTAAQIRDAR
LDPKVKAIVL RVNSPGGSVT ASEVIRAELA AARAAGKPVV VSMGGMAASG GYWISTPANY
IVANPSTLTG SIGIFGVITT VENSLDSIGV HTDGVSTSPL ADVSITRALP PEAQQMMQLS
IENGYKRFIT LVADARHSTP EQIDKIAQGH VWTGQDAKAN GLVDSLGDFD DAVAKAAELA
KVKQWHLEYY VDEPTFFDKV MDNMSGSVRA MLPDAFQAML PAPLASVAST VKSESDKLAA
FNDPQNRYAF CLTCANVR
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