Gene EcolC_1857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1857 
Symbol 
ID6065264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2056459 
End bp2057838 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content49% 
IMG OID641601271 
Productmajor facilitator transporter 
Protein accessionYP_001724833 
Protein GI170019879 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.526363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000247936 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAACAGA TAACAAAACC GCATTGTGGT GCACGGCTGG ATCGCTTACC TGATTGCCGC 
TGGCATTCGT CAATGTTTGC CATCGTCGCG TTTGGCTTGC TTGTCTGCTG GAGTAATGCC
GTTGGTGGCT TGATCCTCGC GCAGCTGAAA GCGTTGGGCT GGACAGATAA TTCCACCACA
GCCACATTCT CAGCAATCAC GACCGCCGGA ATGTTTCTCG GTGCGCTGGT GGGCGGCATC
ATTGGCGACA AAACCGGTCG TAGAAATGCG TTCATCCTCT ATGAGGCCAT TCATATTGCC
TCGATGGTTG TCGGTGCTTT CTCACCGAAT ATGGATTTTC TTATTGCCTG CCGTTTTGTG
ATGGGCGTTG GGCTGGGAGC TTTACTGGTT ACGCTGTTTG CTGGTTTCAC CGAATATATG
CCCGGTAGAA ATCGCGGAAC GTGGTCCAGT CGGGTTTCCT TTATTGGCAA CTGGTCATAT
CCGCTCTGTT CATTGATTGC GATGGGACTC ACGCCGCTGA TTAGTGCTGA GTGGAACTGG
CGGGTACAAC TGCTTATCCC TGCAATATTG TCGCTTATCG CTACGGCGCT GGCCTGGCGC
TACTTTCCTG AATCCCCGCG CTGGCTGGAA TCGCGCGGAC GGTATCAGGA AGCCGAGAAA
GTCATGCGGA GTATAGAAGA AGGCGTCATA CGCCAGACGG GTAAACCTTT GCCGCCTGTG
GTTATTGCTG ATGACGGTAA AGCGCCACAA GCGGTGCCGT ATTCAGCCTT ACTGACAGGA
GTATTACTGA AACGCGTGAT ATTAGGCTCT TGTGTGCTGA TTGCCATGAA CGTTGTGCAG
TACACACTAA TTAACTGGTT GCCAACAATA TTCATGACCC AGGGGATTAA TTTAAAAGAC
TCGATTGTTT TAAATACCAT GAGTATGTTT GGCGCGCCAT TTGGTATTTT TATTGCCATG
CTGGTGATGG ATAAAATTCC GCGTAAAACA ATGGGTGTGG GGCTATTAAT CCTGATTGCG
GTGCTCGGAT ATATCTATTC ACTGCAAACC AGTATGTTGC TCATAACGTT GATTGGTTTC
TTCCTGATTA CTTTCGTCTA TATGTACGTT TGCTATGCCT CGGCAGTGTA TGTCCCTGAA
ATCTGGCCGA CAGAGGCCAA ACTCCGTGGC TCCGGTCTGG CGAATGCGGT AGGGCGAATC
AGTGGTATTG CCGCACCTTA TGCCGTTGCA GTGCTGCTCA GTAGTTATGG CGTAACGGGA
GTCTTTATTC TTCTGGGGGC TGTTTCAATT GTTGTCGCAA TTGCTATCGC CACCATTGGA
ATTGAAACCA AAGGTGTCTC CGTTGAAAGT TTAAGTATTG ATGCAGTAGC CAATAAATGA
 
Protein sequence
MEQITKPHCG ARLDRLPDCR WHSSMFAIVA FGLLVCWSNA VGGLILAQLK ALGWTDNSTT 
ATFSAITTAG MFLGALVGGI IGDKTGRRNA FILYEAIHIA SMVVGAFSPN MDFLIACRFV
MGVGLGALLV TLFAGFTEYM PGRNRGTWSS RVSFIGNWSY PLCSLIAMGL TPLISAEWNW
RVQLLIPAIL SLIATALAWR YFPESPRWLE SRGRYQEAEK VMRSIEEGVI RQTGKPLPPV
VIADDGKAPQ AVPYSALLTG VLLKRVILGS CVLIAMNVVQ YTLINWLPTI FMTQGINLKD
SIVLNTMSMF GAPFGIFIAM LVMDKIPRKT MGVGLLILIA VLGYIYSLQT SMLLITLIGF
FLITFVYMYV CYASAVYVPE IWPTEAKLRG SGLANAVGRI SGIAAPYAVA VLLSSYGVTG
VFILLGAVSI VVAIAIATIG IETKGVSVES LSIDAVANK