Gene EcolC_1840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1840 
Symbol 
ID6067117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2039156 
End bp2039410 
Gene Length255 bp 
Protein Length84 aa 
Translation table11 
GC content52% 
IMG OID641601254 
Producthypothetical protein 
Protein accessionYP_001724816 
Protein GI170019862 
COG category[R] General function prediction only 
COG ID[COG3042] Putative hemolysin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.310442 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.289479 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTA TCAATTTTGC TCTGCCTTGC TTGCTGGTCC TGGCTGGTTG TTCAACTCCT 
TCTCAGCCAG AAGCACCTAA ACCGCCGCAG ATTGGTATGG CAAATCCGGC GTCGGTCTAT
TGCCAGCAGA AGGGCGGGAC GCTCATTCCA GTGCAGACAG CGCAAGGGGT CAGCAACAAT
TGCAAATTAC CGGGCGGTGA AACGATTGAT GAATGGGCAT TGTGGCGGCG TGACCATCCG
GCTGGTGAAA AATAA
 
Protein sequence
MKIINFALPC LLVLAGCSTP SQPEAPKPPQ IGMANPASVY CQQKGGTLIP VQTAQGVSNN 
CKLPGGETID EWALWRRDHP AGEK