| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1839 |
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| Symbol | |
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| ID | 6066355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 2037948 |
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| End bp | 2038973 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641601253 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_001724815 |
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| Protein GI | 170019861 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.730013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.326474 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGATC AGATTATCGC CCGCGTCTCG CAATCCCTTG CCAAAGAACA GTCACTGGAA
AGTCTGGTCC GACAGCTTCT GGAGATGCTG GAAATGGTCA CTGATATGGA ATCAACCTAC
CTGACCAAAG TGGATGTCGA AGCGCGCCTG CAGCATATTA TGTTTGCCCG TAACAGCCAG
AAAATGCACA TCCCGGAGAA TTTTACCGTC TCGTGGGATT ACTCGTTATG CAAACGCGCC
ATTGATGAAA ACTGCTTTTT CAGCGATGAA GTCCCCGACC GTTGGGGTGA CTGTATTGCG
GCACGCAATC TTGGCATCAC CACATTTCTG AGCACGCCAA TTCACTTACC GGATGGATCA
TTCTATGGCA CGCTTTGCGC CGCCAGCAGT GAGAAGCGCC AGTGGAGTGA ACGCGCGGAA
CAGGTTTTAC AGTTATTCGC CGGACTGATT GCACAATATA TTCAAAAAGA GGCACTGGTT
GAACAGCTGC GCGAAGCCAA TGCTGCGCTG ATTGCGCAAT CGTATACCGA CTCGTTAACC
GGGCTACCGA ATCGGCGGGC GATTTTTGAA AATCTGACGA CACTGTTTTC CCTCGCCCGG
CATCTTAACC ATAAGATAAT GATCGCGTTT ATCGATCTGG ATAACTTCAA ATTAATCAAT
GATCGTTTTG GTCATAATAG TGGCGATCTG TTTCTCATTC AGGTTGGCGA GCGCCTTAAT
ACGCTCCAGC AAAATGGCGA AGTTATTGGT CGTCTCGGCG GTGATGAGTT TTTAGTTGTT
TCACTAAACA ACGAGAATGC GGATATTTCG TCGCTGCGAG AACGCATTCA GCAGCAAATA
CGTGGAGAAT ATCACTTAGG TGATGTTGAT TTGTATTATC CCGGTGCCAG TCTTGGCATA
GTAGAAGTCG ATCCTGAAAC AACCGATGCA GACAGTGCCC TGCATGCTGC CGATATTGCG
ATGTATCAGG AGAAAAAACA CAAACAGAAA ACACCTTTTG TCGCGCATCC AGCGCTACAT
TCCTGA
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| Protein sequence | MSDQIIARVS QSLAKEQSLE SLVRQLLEML EMVTDMESTY LTKVDVEARL QHIMFARNSQ
KMHIPENFTV SWDYSLCKRA IDENCFFSDE VPDRWGDCIA ARNLGITTFL STPIHLPDGS
FYGTLCAASS EKRQWSERAE QVLQLFAGLI AQYIQKEALV EQLREANAAL IAQSYTDSLT
GLPNRRAIFE NLTTLFSLAR HLNHKIMIAF IDLDNFKLIN DRFGHNSGDL FLIQVGERLN
TLQQNGEVIG RLGGDEFLVV SLNNENADIS SLRERIQQQI RGEYHLGDVD LYYPGASLGI
VEVDPETTDA DSALHAADIA MYQEKKHKQK TPFVAHPALH S
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