Gene EcolC_1833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1833 
Symbol 
ID6064885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand- 
Start bp2033691 
End bp2034776 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content54% 
IMG OID641601247 
Producttartrate dehydrogenase 
Protein accessionYP_001724809 
Protein GI170019855 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR02089] tartrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.286995 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAA CGATGCGTAT TGCTGCGATC CCGGGAGACG GGATTGGCAA AGAAGTCCTT 
CCTGAAGGGA TTCGCGTGTT ACAGGCTGCC GCTGAGCGCT GGGGCTTCGC CTTGAGTTTT 
GAGCAAATGG AGTGGGCGAG CTGCGAGTAT TACAGCCATC ACGGTAAAAT GATGCCGGAC 
GACTGGCATG AGCAACTTAG CCGTTTCGAC GCCATCTATT TTGGTGCCGT CGGCTGGCCG 
GACACCGTTC CGGACCATAT TTCGTTGTGG GGTTCGCTGC TGAAATTTCG TCGTGAATTC 
GACCAGTACG TCAACCTGCG CCCGGTTCGT CTCTTTCCTG GCGTTCCCTG CCCGCTGGCG 
GGAAAACAGC CTGGCGACAT CGATTTTTAC GTGGTCAGGG AAAACACCGA AGGCGAATAT 
TCCTCGCTCG GCGGTAGAGT GAATGAAGGT ACAGAGCATG AAGTCGTCAT TCAGGAATCG 
GTATTTACCC GCCGTGGTGT CGATCGCATT TTGCGTTATG CCTTCGAACT TGCGCAAAGC 
CGTCCACGTA AGACACTAAC TTCTGCCACT AAATCGAACG GTTTAGCCAT CAGCATGCCG 
TACTGGGATG AGCGAGTGGA AGCAATGGCC GAGAATTACC CGGAGATCCG CTGGGACAAG 
CAGCATATTG ATATTCTCTG CGCGCGTTTT GTGATGCAGC CGGAACGATT CGATGTGGTG 
GTGGCGTCCA ATTTGTTTGG CGATATCCTT TCCGATCTTG GCCCGGCCTG CACCGGCACC 
ATTGGCATTG CCCCATCCGC CAACCTGAAT CCGGAACGCA CTTTCCCGTC GCTCTTCGAG 
CCTGTCCACG GTTCCGCGCC GGATATCTAC GGGAAAAATA TTGCTAACCC TATCGCCACG 
ATTTGGGCCG GGGCAATGAT GCTCGATTTT CTCGGCAATG GCGATGAGCG TTTCCAGCAA 
GCGCATAACG GTATTCTGGC AGCAATTGAA GAAGTGATTG CTCACGGGCC GAAAACACCT 
GATATGAAAG GCAATGCCAC CACGCCACAG GTTGCCGACG CGATTTGCAA AATTATTTTG 
CGTTAA
 
Protein sequence
MMKTMRIAAI PGDGIGKEVL PEGIRVLQAA AERWGFALSF EQMEWASCEY YSHHGKMMPD 
DWHEQLSRFD AIYFGAVGWP DTVPDHISLW GSLLKFRREF DQYVNLRPVR LFPGVPCPLA 
GKQPGDIDFY VVRENTEGEY SSLGGRVNEG TEHEVVIQES VFTRRGVDRI LRYAFELAQS 
RPRKTLTSAT KSNGLAISMP YWDERVEAMA ENYPEIRWDK QHIDILCARF VMQPERFDVV 
VASNLFGDIL SDLGPACTGT IGIAPSANLN PERTFPSLFE PVHGSAPDIY GKNIANPIAT 
IWAGAMMLDF LGNGDERFQQ AHNGILAAIE EVIAHGPKTP DMKGNATTPQ VADAICKIIL 
R