| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1832 |
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| Symbol | |
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| ID | 6065852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 2032055 |
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| End bp | 2033500 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641601246 |
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| Product | putative transporter |
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| Protein accession | YP_001724808 |
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| Protein GI | 170019854 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.301874 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGTTTTGC TGGCAATGGG ACTGGTGATT TATTTAGCCA CCAGTAAATA CGGCAATATT
CGTCTTGGCG AAGGAAAACC GGAATACAGC ACGCTCTCCT GGCTGTTTAT GTTTATTTGT
GCCGGTTTAG GTTCTTCTAC GCTTTATTGG GGGGTTGCTG AATGGGCCTA TTATTATCAA
ACGCCTGGAT TAAATATCGC ACCGCGTTCA CAACAGGCAC TCGAATTTAG CGTTCCCTAC
TCTTTCTTCC ACTGGGGCAT CAGCGCCTGG GCAACTTATA CGCTGGCCTC ATTAATCATG
GCTTATCACT TTCATGTGCG GAAAAACAAA GGTCTGAGCC TTTCCGGCAT TATTGCTGCT
ATTACCGGCG TTCGCCCGCA AGGCCCATGG GGAAAACTGG TCGATTTGAT GTTCCTGATC
GCCACTGTCG GCGCACTGAC CATTTCCCTT GTTGTTACCG CAGCAACCTT TACTCGTGGA
CTTTCCGCGC TGACCGGTTT ACCCGATAAC TTCACCGTGC AGGCATTTGT GATCCTGCTT
TCCGGCGGCA TTTTTTGCCT AAGCTCGTGG ATTGGTATCA ACAACGGTTT GCAACGTCTG
AGCAAAATGG TTGGCTGGGG CGCGTTCCTG CTGCCATTAC TGGTGCTGAT TGTCGGCCCA
ACCGAATTTA TTACCAACAG CATCATCAAT GCCATCGGCC TGACCACGCA AAACTTCCTG
CAAATGAGCT TATTCACCGA TCCGCTTGGC GATGGTTCAT TTACCCGCAA CTGGACCGTT
TTCTACTGGC TGTGGTGGAT CTCATACACC CCTGGCGTAG CAATGTTTGT CACCCGCGTT
TCCCGCGGTC GTAAGATTAA AGAAGTTATC TGGGGACTGA TCCTCGGCAG CACCGTCGGT
TGCTGGTTCT TCTTTGGCGT AATGGAAAGC TATGCCATTC ATCAGTTTAT CAATGGCGTA
ATCAACGTCC CACAGGTGCT GGAAACACTG GGCGGCGAAA CAGCTGTGCA GCAAGTTCTG
ATGTCGTTGC CAGCCGGTAA ATTGTTCCTC GCCGCATACC TGGGCGTGAT GATTATTTTC
CTTGCCTCGC ATATGGATGC GGTGGCCTAC ACCATGGCTG CGACCAGTAC GCGTAATCTC
CAGGAAGGTG ACGATCCTGA CCGTGGGCTG CGTCTTTTCT GGTGCGTGGT GATCACTCTG
ATCCCGCTTT CCATCTTGTT TACCGGTGCT TCGCTGGAAA CGATGAAAAC CACCGTCGTG
CTCACAGCCC TTCCCTTCCT CGTCATTTTA CTGGTGAAAG TCGGCGGATT TATTCGCTGG
CTGAAACAGG ATTACGCCGA CATTCCGGCT CATCAAGTTG AACATTATCT CCCGCAGACA
CCGGTTGAAG CCCTGGAAAA AACGCCAGTG CTCCCTGCGG GAACCGTATT CAAAGGCGAC
AACTGA
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| Protein sequence | MVLLAMGLVI YLATSKYGNI RLGEGKPEYS TLSWLFMFIC AGLGSSTLYW GVAEWAYYYQ
TPGLNIAPRS QQALEFSVPY SFFHWGISAW ATYTLASLIM AYHFHVRKNK GLSLSGIIAA
ITGVRPQGPW GKLVDLMFLI ATVGALTISL VVTAATFTRG LSALTGLPDN FTVQAFVILL
SGGIFCLSSW IGINNGLQRL SKMVGWGAFL LPLLVLIVGP TEFITNSIIN AIGLTTQNFL
QMSLFTDPLG DGSFTRNWTV FYWLWWISYT PGVAMFVTRV SRGRKIKEVI WGLILGSTVG
CWFFFGVMES YAIHQFINGV INVPQVLETL GGETAVQQVL MSLPAGKLFL AAYLGVMIIF
LASHMDAVAY TMAATSTRNL QEGDDPDRGL RLFWCVVITL IPLSILFTGA SLETMKTTVV
LTALPFLVIL LVKVGGFIRW LKQDYADIPA HQVEHYLPQT PVEALEKTPV LPAGTVFKGD
N
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