Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1825 |
Symbol | |
ID | 6065726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 2023454 |
End bp | 2025364 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641601239 |
Product | helicase c2 |
Protein accession | YP_001724801 |
Protein GI | 170019847 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.979985 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.491186 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGACG ATTTTGCACC AGACGGTCAG CTGGCGAAAG CGATACCAGG CTTTAAGCCG CGAGAACCAC AGCGACAGAT GGCGGTAGCC GTCACCCAGG CGATAGAAAA AGGCCAGCCG CTGGTGGTGG AAGCAGGAAC CGGTACGGGC AAAACCTACG CTTACCTGGC TCCTGCGCTG CGGGCGAAAA AGAAAGTCAT TATCTCGACC GGCTCAAAAG CGTTGCAGGA TCAGCTCTAC AGCCGCGATT TGCCAACAGT CTCAAAGGCA TTGAAATATA CGGGCAACGT GGCGCTGCTG AAAGGGCGCT CAAACTACCT CTGCCTCGAA CGTCTCGAAC AGCAGGCGCT GGCGGGGGGC GATCTGCCGG TACAAATCTT AAGCGATGTG ATCCTGCTGC GCTCCTGGTC TAATCAAACA GTCGATGGTG ATATCAGCAC CTGCGTCAGC GTGGCGGAAG ATTCACAGGC GTGGCCGCTG GTTACCAGCA CCAACGACAA CTGTCTTGGC AGCGACTGCC CGATGTATAA AGATTGCTTT GTGGTCAAAG CACGTAAAAA AGCGATGGAC GCCGATGTGG TGGTGGTAAA CCATCATCTC TTTCTGGCGG ATATGGTGGT TAAAGAGAGT GGATTTGGCG AACTGATCCC GGAAGCGGAC GTCATGATCT TCGACGAAGC CCACCAGCTA CCGGACATTG CCAGCCAGTA TTTTGGTCAG TCACTCTCCA GTCGACAACT GCTCGACCTG GCAAAAGACA TCACCATCGC CTACCGCACC GAATTAAAAG ACACCCAGCA GTTACAAAAG TGCGCTGATC GTCTTGCCCA GAGTGCGCAG GATTTTCGTC TGCAACTCGG TGAGCCAGGT TATCGCGGTA ACCTGCGTGA GCTGTTAGCT AATCCGCAAA TTCAGCGGGC ATTTTTACTG CTCGATGACA CCCTGGAACT TTGTTATGAC GTGGCGAAAC TGTCACTGGG GCGTTCCGCC TTGCTGGATG CGGCATTTGA GCGCGCTACG TTGTATCGCA CACGGCTGAA GCGGCTAAAA GAGATCAATC AGCCGGGCTA CAGCTACTGG TACGAATGCA CTTCGCGCCA TTTTACTCTG GCTCTCACGC CGCTCAGCGT GGCGGATAAA TTCAAAGAGT TAATGGCGCA AAAACCCGGT AGCTGGATCT TCACCTCAGC AACGCTGTCG GTGAACGACG ATCTGCATCA TTTCACCTCG CGGCTTGGCA TCGAACAGGC CGAGTCGTTG CTGTTGCCCA GCCCATTTGA TTACAGCCGC CAGGCGTTAC TCTGTGTGCC GCGCAATCTG CCGCAAACCA ACCAGCCAGG TTCTGCTCGC CAGTTAGCGG CAATGCTGCG ACCGATCATC GAAGCTAACA ACGGTCGTTG TTTTATGCTT TGTACCTCGC ACGCCATGAT GCGCGATCTG GCCGAGCAGT TCCGCGCTAC CATGACGCTT CCTGTATTGT TGCAGGGGGA AACCAGCAAA GGGCAACTGT TGCAGCAATT TGTCAGCGCC GGTAATGCGC TTCTTGTGGC AACCAGCAGT TTCTGGGAAG GGGTGGACGT GCGTGGCGAT ACATTGTCAT TGGTAATTAT CGACAAATTG CCGTTTACCT CGCCGGATGA TCCACTGTTA AAAGCGCGCA TGGAAGATTG TCGTTTGCGC GGTGGCGACC CGTTCGATGA AGTGCAACTA CCAGATGCCG TCATTACTCT CAAACAGGGG GTAGGGCGAC TGATTCGCGA CGCCGACGAT CGTGGCGTGC TGGTGATTTG TGACAATCGG CTGGTGATGC GTCCTTACGG CGCGACGTTT CTCGCCAGTC TGCCGCCCGC GCCACGCACC CGTGACATTG CCCGTGCGGT TCGTTTCCTT GCGATACCAT CCTCCAGGTA A
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Protein sequence | MTDDFAPDGQ LAKAIPGFKP REPQRQMAVA VTQAIEKGQP LVVEAGTGTG KTYAYLAPAL RAKKKVIIST GSKALQDQLY SRDLPTVSKA LKYTGNVALL KGRSNYLCLE RLEQQALAGG DLPVQILSDV ILLRSWSNQT VDGDISTCVS VAEDSQAWPL VTSTNDNCLG SDCPMYKDCF VVKARKKAMD ADVVVVNHHL FLADMVVKES GFGELIPEAD VMIFDEAHQL PDIASQYFGQ SLSSRQLLDL AKDITIAYRT ELKDTQQLQK CADRLAQSAQ DFRLQLGEPG YRGNLRELLA NPQIQRAFLL LDDTLELCYD VAKLSLGRSA LLDAAFERAT LYRTRLKRLK EINQPGYSYW YECTSRHFTL ALTPLSVADK FKELMAQKPG SWIFTSATLS VNDDLHHFTS RLGIEQAESL LLPSPFDYSR QALLCVPRNL PQTNQPGSAR QLAAMLRPII EANNGRCFML CTSHAMMRDL AEQFRATMTL PVLLQGETSK GQLLQQFVSA GNALLVATSS FWEGVDVRGD TLSLVIIDKL PFTSPDDPLL KARMEDCRLR GGDPFDEVQL PDAVITLKQG VGRLIRDADD RGVLVICDNR LVMRPYGATF LASLPPAPRT RDIARAVRFL AIPSSR
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