Gene EcolC_1824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1824 
Symbol 
ID6066131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2022978 
End bp2023325 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content52% 
IMG OID641601238 
Productendoribonuclease L-PSP 
Protein accessionYP_001724800 
Protein GI170019846 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.208797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.387771 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACTA TCGTTCGTAT CGATGCTGAA GCCCGCTGGT CTGATGTAGT AATCCACAAC 
AACACGCTCT ACTACACTGG TGTACCGGAA AACCTCGACG CCGATGCCTT TGAGCAAACC
GCCAACACGC TGGCACAGAT TGACGCCGTG CTGGAAAAAC AGGGCAGCAA TAAATCGAGC
ATTCTGGATG CCACCATTTT CCTGGCCGAT AAAAACGACT TCGCGGCGAT GAATAAAGCG
TGGGATGCCT GGGTTGTCGC GGGTCATGCG CCGGTGCGCT GCACGGTACA AGCGGGTTTG
ATGAACCCGA AGTATAAAGT TGAAATTAAG ATTGTGGCTG CGGTGTAA
 
Protein sequence
MMTIVRIDAE ARWSDVVIHN NTLYYTGVPE NLDADAFEQT ANTLAQIDAV LEKQGSNKSS 
ILDATIFLAD KNDFAAMNKA WDAWVVAGHA PVRCTVQAGL MNPKYKVEIK IVAAV