Gene EcolC_1820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1820 
Symbol 
ID6065776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2019941 
End bp2020519 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content55% 
IMG OID641601234 
Producthypothetical protein 
Protein accessionYP_001724796 
Protein GI170019842 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.288168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.82887 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAATACC GTAGCCTGAC GCTTGATGAT TTTTTATCGC GCTTTCAACT TTTGCGCCCG 
CAAATTAACC GGGAAACCCT AAATCATCGT CAGGCTGCTG TGTTAATCCC CATCGTCCGT
CGACCGCAAC CGGGGTTGTT GCTGACTCAG CGTTCGATTC ATCTGCGTAA ACACGCTGGA
CAAGTGGCAT TCCCTGGAGG TGCAGTCGAT GACACGGACG CATCAGCTAT CGCCGCCGCG
CTGCGCGAAG CTGAAGAAGA GGTCGCTATA CCGCCTTCCG CCGTTGAAGT TATCGGCGTG
CTGCCGCCCG TCGATAGCGT CACTGGCTAC CAGGTAACCC CAGTGGTCGG CATTATCCCG
CCCGATCTGC CGTATCGCGC CAGTGAAGAT GAAGTCTCGG CGGTGTTTGA AATGCCGCTC
GCCCAGGCAT TACATCTGGG TCGTTATCAC CCTTTAGATA TCTACCGCCG TGGTGATTCA
CATCGGGTAT GGCTGTCCTG GTACGAACAG TATTTTGTAT GGGGAATGAC CGCAGGCATA
ATTCGTGAGC TGGCGCTGCA AATTGGTGTG AAACCCTGA
 
Protein sequence
MEYRSLTLDD FLSRFQLLRP QINRETLNHR QAAVLIPIVR RPQPGLLLTQ RSIHLRKHAG 
QVAFPGGAVD DTDASAIAAA LREAEEEVAI PPSAVEVIGV LPPVDSVTGY QVTPVVGIIP
PDLPYRASED EVSAVFEMPL AQALHLGRYH PLDIYRRGDS HRVWLSWYEQ YFVWGMTAGI
IRELALQIGV KP