Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1819 |
Symbol | |
ID | 6064759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 2018393 |
End bp | 2019757 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641601233 |
Product | L-serine dehydratase 1 |
Protein accession | YP_001724795 |
Protein GI | 170019841 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.561411 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.687131 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTAGTC TATTCGACAT GTTTAAGGTG GGGATTGGTC CCTCATCTTC CCATACCGTA GGGCCTATGA AGGCAGGTAA ACAGTTCGTC GATGATCTGG TCGAAAAAGG CTTACTGGAT AGCGTTACTC GCGTTGCCGT GGACGTTTAT GGTTCACTGT CGCTGACGGG TAAAGGCCAC CACACCGATA TCGCCATTAT TATGGGTCTT GCAGGTAACG AACCTGCCAC CGTGGATATC GACAGTATTC CCGGTTTTAT TCGCGACGTA GAAGAGCGCG AACGTCTGCT GCTGGCACAG GGACGGCATG AAGTGGATTT CCCGCGCGAC AACGGGATGC GTTTTCATAA CGGCAACCTG CCGCTGCATG AAAACGGTAT GCAAATCCAC GCCTATAACG GCGATGAAGT CGTCTACAGC AAAACTTATT ATTCCATCGG CGGCGGTTTT ATCGTCGATG AAGAACACTT TGGTCAGGAT GCTGCCAACG AAGTAAGCGT GCCGTATCCG TTCAAATCTG CCACCGAACT GCTCGCGTAC TGTAATGAAA CCGGCTATTC GCTGTCTGGT CTCGCTATGC AGAACGAACT GGCGCTGCAC AGCAAGAAAG AGATCGACGA GTATTTCGCG CATGTCTGGC AAACCATGCA GGCATGTATC GATCGCGGGA TGAACACCGA AGGTGTACTG CCAGGCCCGC TGCGCGTGCC ACGTCGTGCG TCTGCCCTGC GCCGGATGCT GGTTTCCAGC GATAAACTGT CTAACGATCC GATGAATGTC ATTGACTGGG TAAACATGTT TGCGCTGGCA GTTAACGAAG AAAACGCCGC CGGTGGTCGT GTGGTAACTG CGCCAACCAA CGGTGCCTGC GGTATCGTTC CGGCAGTGCT GGCTTACTAT GACCACTTTA TTGAATCGGT CAGCCCGGAC ATCTATACCC GTTACTTTAT GGCAGCGGGC GCGATTGGTG CATTGTATAA AATGAACGCC TCTATTTCCG GTGCGGAAGT TGGTTGCCAG GGCGAAGTGG GTGTTGCCTG TTCAATGGCT GCTGCGGGTC TTGCAGAACT GCTGGGCGGT AGCCCGGAAC AGGTTTGCGT GGCGGCGGAA ATTGGCATGG AACACAACCT TGGTTTAACC TGCGACCCGG TTGCAGGGCA GGTTCAGGTG CCGTGCATTG AGCGTAATGC CATTGCCTCT GTGAAGGCGA TTAACGCCGC GCGGATGGCT CTGCGCCGCA CCAGTGCACC GCGCGTCTCG CTGGATAAGG TCATCGAAAC GATGTACGAA ACCGGTAAGG ACATGAACGC CAAATACCGC GAAACCTCAC GCGGTGGTCT GGCAATCAAA GTCCAGTGTG ACTAA
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Protein sequence | MISLFDMFKV GIGPSSSHTV GPMKAGKQFV DDLVEKGLLD SVTRVAVDVY GSLSLTGKGH HTDIAIIMGL AGNEPATVDI DSIPGFIRDV EERERLLLAQ GRHEVDFPRD NGMRFHNGNL PLHENGMQIH AYNGDEVVYS KTYYSIGGGF IVDEEHFGQD AANEVSVPYP FKSATELLAY CNETGYSLSG LAMQNELALH SKKEIDEYFA HVWQTMQACI DRGMNTEGVL PGPLRVPRRA SALRRMLVSS DKLSNDPMNV IDWVNMFALA VNEENAAGGR VVTAPTNGAC GIVPAVLAYY DHFIESVSPD IYTRYFMAAG AIGALYKMNA SISGAEVGCQ GEVGVACSMA AAGLAELLGG SPEQVCVAAE IGMEHNLGLT CDPVAGQVQV PCIERNAIAS VKAINAARMA LRRTSAPRVS LDKVIETMYE TGKDMNAKYR ETSRGGLAIK VQCD
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