Gene EcolC_1800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1800 
Symbol 
ID6066671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1999786 
End bp2000283 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content50% 
IMG OID641601215 
Productputative GAF sensor protein 
Protein accessionYP_001724777 
Protein GI170019823 
COG category[T] Signal transduction mechanisms 
COG ID[COG1956] GAF domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.657978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0831768 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAA CAGAATTTTA CGCGGATTTA AATCGCGACT TTAACGCGCT GATGGCGGGA 
GAAACCAGTT TTCTGGCAAC GCTTGCGAAC ACCAGTGCGT TGTTATACGA GCGTCTCACT
GACGTAAACT GGGCAGGTTT TTATTTGCTT GAGGACGATA CACTGGTACT CGGACCATTT
CAGGGCAAAA TTGCCTGTGT CCGGATACCC GTCGGGCGCG GGGTGTGCGG CACTGCGGTT
GCCCGCAATC AAGTGCAGCG TATCGAGGAT GTTCACGCGT TTGACGGGCA TATTGCCTGT
GATGCGGCGA GTAATTCTGA AATTGTTCTG CCGCTGGTGG TGAAAAATCA GATTATTGGT
GTTCTTGACA TCGATAGTAC CGTCTTCGGT CGCTTTACAG ACGAGGACGA GCAAGGCTTA
CGTCAGCTTG TGGCACAGCT TGAAAAAGTG CTTGCAACGA CGGATTACAA AAAATTCTTT
GCGAGCGTCG CAGGATAA
 
Protein sequence
MNKTEFYADL NRDFNALMAG ETSFLATLAN TSALLYERLT DVNWAGFYLL EDDTLVLGPF 
QGKIACVRIP VGRGVCGTAV ARNQVQRIED VHAFDGHIAC DAASNSEIVL PLVVKNQIIG
VLDIDSTVFG RFTDEDEQGL RQLVAQLEKV LATTDYKKFF ASVAG