Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1779 |
Symbol | |
ID | 6064936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 1978393 |
End bp | 1979262 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641601194 |
Product | DNA-binding transcriptional regulator HexR |
Protein accession | YP_001724756 |
Protein GI | 170019802 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0686365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.239123 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATGC TGGAAAAAAT CCAGTCTCAG CTGGAACATT TGAGCAAATC AGAGCGCAAA GTTGCCGAGG TCATTCTGGC TTCGCCCGAT AACGCGATCC ATTCGAGTAT TGCTGCTATG GCACTGGAAG CCAATGTTAG CGAACCGACG GTGAATCGTT TCTGTCGCAG CATGGACACG CGCGGTTTTC CTGATTTTAA ACTTCATCTG GCACAGAGTC TGGCGAATGG CACTCCCTAT GTTAATCGCA ATGTCAATGA AGATGACAGC GTTGAATCAT ACACAGGGAA AATATTTGAG TCCGCAATGG CAACGCTTGA TCATGTCCGT CATTCACTGG ATAAATCTGC CATCAACCGC GCCGTCGACT TGCTCACTCA GGCAAAAAAA ATCGCCTTTT TCGGATTAGG CTCTTCAGCC GCCGTTGCCC ACGATGCGAT GAATAAGTTC TTTCGTTTTA ATGTTCCGGT GGTGTACTCC GATGATATCG TGCTGCAACG CATGAGTTGT ATGAATTGTA GCGACGGAGA CGTGGTGGTG CTGATTTCTC ACACTGGAAG AACAAAAAAT CTGGTCGAGC TGGCGCAGCT GGCACGCGAA AACGACGCCA TGGTGATTGC CCTCACCTCT GCGGGTACCC CGCTCGCCCG GGAAGCAACG CTGGCAATTA CCCTCGACGT ACCGGAAGAT ACTGACATTT ATATGCCCAT GGTTTCTCGA CTTGCACAGC TGACCGTGAT AGATGTGCTG GCGACAGGAT TTACTTTGCG ACGCGGTGCA AAATTCAGAG ATAACTTGAA GCGGGTCAAA GAAGCGCTGA AGGAATCGCG TTTTGATAAG CAGTTACTTA ATTTAAGTGA CGATCGCTAA
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Protein sequence | MNMLEKIQSQ LEHLSKSERK VAEVILASPD NAIHSSIAAM ALEANVSEPT VNRFCRSMDT RGFPDFKLHL AQSLANGTPY VNRNVNEDDS VESYTGKIFE SAMATLDHVR HSLDKSAINR AVDLLTQAKK IAFFGLGSSA AVAHDAMNKF FRFNVPVVYS DDIVLQRMSC MNCSDGDVVV LISHTGRTKN LVELAQLARE NDAMVIALTS AGTPLAREAT LAITLDVPED TDIYMPMVSR LAQLTVIDVL ATGFTLRRGA KFRDNLKRVK EALKESRFDK QLLNLSDDR
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