Gene EcolC_1779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1779 
Symbol 
ID6064936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1978393 
End bp1979262 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content49% 
IMG OID641601194 
ProductDNA-binding transcriptional regulator HexR 
Protein accessionYP_001724756 
Protein GI170019802 
COG category[K] Transcription 
COG ID[COG1737] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0686365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.239123 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATGC TGGAAAAAAT CCAGTCTCAG CTGGAACATT TGAGCAAATC AGAGCGCAAA 
GTTGCCGAGG TCATTCTGGC TTCGCCCGAT AACGCGATCC ATTCGAGTAT TGCTGCTATG
GCACTGGAAG CCAATGTTAG CGAACCGACG GTGAATCGTT TCTGTCGCAG CATGGACACG
CGCGGTTTTC CTGATTTTAA ACTTCATCTG GCACAGAGTC TGGCGAATGG CACTCCCTAT
GTTAATCGCA ATGTCAATGA AGATGACAGC GTTGAATCAT ACACAGGGAA AATATTTGAG
TCCGCAATGG CAACGCTTGA TCATGTCCGT CATTCACTGG ATAAATCTGC CATCAACCGC
GCCGTCGACT TGCTCACTCA GGCAAAAAAA ATCGCCTTTT TCGGATTAGG CTCTTCAGCC
GCCGTTGCCC ACGATGCGAT GAATAAGTTC TTTCGTTTTA ATGTTCCGGT GGTGTACTCC
GATGATATCG TGCTGCAACG CATGAGTTGT ATGAATTGTA GCGACGGAGA CGTGGTGGTG
CTGATTTCTC ACACTGGAAG AACAAAAAAT CTGGTCGAGC TGGCGCAGCT GGCACGCGAA
AACGACGCCA TGGTGATTGC CCTCACCTCT GCGGGTACCC CGCTCGCCCG GGAAGCAACG
CTGGCAATTA CCCTCGACGT ACCGGAAGAT ACTGACATTT ATATGCCCAT GGTTTCTCGA
CTTGCACAGC TGACCGTGAT AGATGTGCTG GCGACAGGAT TTACTTTGCG ACGCGGTGCA
AAATTCAGAG ATAACTTGAA GCGGGTCAAA GAAGCGCTGA AGGAATCGCG TTTTGATAAG
CAGTTACTTA ATTTAAGTGA CGATCGCTAA
 
Protein sequence
MNMLEKIQSQ LEHLSKSERK VAEVILASPD NAIHSSIAAM ALEANVSEPT VNRFCRSMDT 
RGFPDFKLHL AQSLANGTPY VNRNVNEDDS VESYTGKIFE SAMATLDHVR HSLDKSAINR
AVDLLTQAKK IAFFGLGSSA AVAHDAMNKF FRFNVPVVYS DDIVLQRMSC MNCSDGDVVV
LISHTGRTKN LVELAQLARE NDAMVIALTS AGTPLAREAT LAITLDVPED TDIYMPMVSR
LAQLTVIDVL ATGFTLRRGA KFRDNLKRVK EALKESRFDK QLLNLSDDR