Gene EcolC_1776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1776 
Symbol 
ID6065745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1974279 
End bp1975601 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content53% 
IMG OID641601191 
Producthypothetical protein 
Protein accessionYP_001724753 
Protein GI170019799 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000317074 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAACAGA TAGCCCGCTC TGTCGCCCTG GCGTTTAATA ATTTACCGCG ACCACACCGC 
GTTATGTTGG GGTCGCTCAC CGTTCTTACT CTGGCCGTCG CTGTCTGGCG GCCTTATGTT
TATCACCGTG ATGCCACGCC AATTGTCAAA ACCATTGAGC TGGAACAGAA CGAAATTCGT
TCGCTCTTAC CTGAAGCCAG TGAGCCGATT GATCAAGCTG CACAAGAAGA TGAAGCCATT
CCCCAGGACG AACTGGATGA CAAAATCGCC GGTGAAGCGG GCGTGCATGA ATATGTTGTT
TCCACTGGCG ATACGCTAAG CAGCATTCTC AATCAGTATG GTATTGATAT GGGTGATATC
ACCCAACTGG CTGCGGCCGA CAAAGAATTG CGTAACCTGA AAATCGGTCA ACAACTCTCC
TGGACATTAA CCGCGGACGG CGAACTGCAG CGCCTCACCT GGGAAGTGTC TCGTCGTGAA
ACCCGAACCT ATGACCGTAC TGCCGCTAAC GGTTTTAAAA TGACCAGCGA AATGCAGCAA
GGAGAGTGGG TTAACAATCT GCTGAAAGGT ACCGTCGGGG GAAGCTTTGT TGCCAGCGCC
AGAAACGCCG GTTTAACCAG CGCCGAAGTG AGCGCAGTGA TTAAAGCCAT GCAGTGGCAA
ATGGATTTCC GCAAACTGAA AAAAGGCGAT GAATTTGCGG TGTTAATGTC TCGAGAAATG
CTTGATGGTA AACGTGAGCA AAGCCAGCTG CTGGGCGTAC GTTTGCGTTC AGAAGGTAAA
GATTATTACG CTATCCGCGC TGAAGATGGC AAATTCTACG ATCGTAACGG TACTGGTCTG
GCGAAAGGAT TCTTGCGATT CCCGACGGCG AAACAGTTCC GTATCTCGTC TAACTTTAAC
CCGCGTCGTA CTAATCCGGT GACCGGTCGC GTTGCACCAC ACAGAGGTGT TGATTTCGCC
ATGCCGCAGG GTACGCCAGT GCTTTCAGTG GGTGACGGTG AAGTGGTGGT TGCCAAACGC
AGTGGCGCAG CAGGTTATTA TGTGGCTATT CGTCATGGTC GCAGCTACAC CACGCGTTAT
ATGCACTTGC GCAAGATTCT GGTGAAACCG GGACAGAAGG TGAAACGTGG CGACCGTATC
GCGCTTTCCG GTAATACCGG ACGTTCAACC GGGCCGCATC TGCACTATGA AGTATGGATA
AACCAGCAGG CCGTAAACCC GCTGACGGCA AAACTGCCGC GTACCGAAGG GCTGACCGGC
TCCGATCGTC GCGAATTCCT GGCGCAGGCC AAAGAGATTG TGCCGCAGCT ACGGTTTGAT
TAA
 
Protein sequence
MQQIARSVAL AFNNLPRPHR VMLGSLTVLT LAVAVWRPYV YHRDATPIVK TIELEQNEIR 
SLLPEASEPI DQAAQEDEAI PQDELDDKIA GEAGVHEYVV STGDTLSSIL NQYGIDMGDI
TQLAAADKEL RNLKIGQQLS WTLTADGELQ RLTWEVSRRE TRTYDRTAAN GFKMTSEMQQ
GEWVNNLLKG TVGGSFVASA RNAGLTSAEV SAVIKAMQWQ MDFRKLKKGD EFAVLMSREM
LDGKREQSQL LGVRLRSEGK DYYAIRAEDG KFYDRNGTGL AKGFLRFPTA KQFRISSNFN
PRRTNPVTGR VAPHRGVDFA MPQGTPVLSV GDGEVVVAKR SGAAGYYVAI RHGRSYTTRY
MHLRKILVKP GQKVKRGDRI ALSGNTGRST GPHLHYEVWI NQQAVNPLTA KLPRTEGLTG
SDRREFLAQA KEIVPQLRFD