Gene EcolC_1771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1771 
SymbolruvA 
ID6066611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1969938 
End bp1970549 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content53% 
IMG OID641601186 
ProductHolliday junction DNA helicase RuvA 
Protein accessionYP_001724748 
Protein GI170019794 
COG category[L] Replication, recombination and repair 
COG ID[COG0632] Holliday junction resolvasome, DNA-binding subunit 
TIGRFAM ID[TIGR00084] Holliday junction DNA helicase, RuvA subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0290161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATAGGCA GACTCAGAGG CATCATCATT GAAAAACAAC CCCCGCTGGT GTTAATTGAA 
GTGGGCGGCG TAGGCTATGA AGTGCATATG CCGATGACCT GTTTTTATGA ACTCCCTGAA
GCGGGTCAGG AAGCGATCGT TTTCACCCAC TTTGTGGTGC GTGAAGACGC GCAACTGCTG
TACGGTTTTA ACAATAAACA AGAGCGCACA TTGTTCAAAG AGTTGATCAA AACCAACGGC
GTCGGCCCGA AGTTGGCGCT GGCGATCCTC TCCGGAATGT CAGCGCAGCA GTTCGTTAAT
GCCGTTGAGC GTGAAGAAGT GGGGGCACTG GTGAAACTGC CGGGTATTGG CAAAAAAACC
GCCGAACGCT TGATTGTTGA AATGAAAGAC CGATTTAAAG GTTTGCATGG CGATCTCTTT
ACGCCAGCCG CCGATCTGGT GCTCACGTCG CCTGCCAGCC CGGCAACCAA CGATGCTGAA
CAGGAAGCGG TTGCTGCGCT GGTGGCGCTG GGCTATAAAC CACAAGAAGC CAGCCGCATG
GTGAGCAAAA TCGCTCGCCC TGACGCCAGC AGTGAAACAT TAATTCGCGA AGCCCTACGC
GCCGCGTTAT GA
 
Protein sequence
MIGRLRGIII EKQPPLVLIE VGGVGYEVHM PMTCFYELPE AGQEAIVFTH FVVREDAQLL 
YGFNNKQERT LFKELIKTNG VGPKLALAIL SGMSAQQFVN AVEREEVGAL VKLPGIGKKT
AERLIVEMKD RFKGLHGDLF TPAADLVLTS PASPATNDAE QEAVAALVAL GYKPQEASRM
VSKIARPDAS SETLIREALR AAL