Gene EcolC_1734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1734 
Symbol 
ID6065782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1930562 
End bp1931551 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content52% 
IMG OID641601149 
Productmonosaccharide-transporting ATPase 
Protein accessionYP_001724711 
Protein GI170019757 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.783762 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAAT TTACTAAAGC CCTGGCAGCC ATTGGTCTGG CAGCCGTTAT GTCACAATCC 
GCTATGGCGG AGAACCTGAA GCTCGGTTTT CTGGTGAAGC AACCGGAAGA GCCGTGGTTC
CAGACCGAAT GGAAGTTTGC CGATAAAGCC GGGAAGGATT TAGGGTTTGA GGTTATTAAG
ATTGCCGTGC CGGATGGCGA AAAAACATTG AACGCGATCG ACAGCCTGGC TGCCAGTGGC
GCAAAAGGTT TCGTTATTTG TACTCCGGAC CCCAAACTCG GCTCTGCCAT CGTCGCGAAA
GCGCGTGGCT ACGATATGAA AGTCATTGCC GTGGATGACC AGTTTGTTAA CGCCAAAGGT
AAGCCAATGG ATACCGTTCC GCTGGTGATG ATGGCGGCGA CTAAAATTGG CGAACGTCAG
GGCCAGGAAC TGTATAAAGA GATGCAGAAA CGTGGCTGGG ATGTCAAAGA AAGCGCGGTG
ATGGCGATTA CCGCCAACGA ACTGGATACC GCCCGCCGCC GTACTACGGG ATCTATGGAT
GCGCTGAAAG CGGCCGGATT CCCGGAAAAA CAAATTTATC AGGTACCTAC CAAATCTAAC
GACATCCCGG GGGCATTTGA CGCTGCCAAC TCAATGCTGG TTCAACATCC GGAAGTTAAA
CATTGGCTGA TCGTCGGTAT GAACGACAGC ACCGTGCTGG GCGGCGTACG CGCGACGGAA
GGTCAGGGCT TTAAAGCGGC CGATATCATC GGCATTGGCA TTAACGGTGT GGATGCGGTG
AGCGAACTGT CTAAAGCACA GGCAACCGGC TTCTACGGTT CCCTGCTGCC AAGCCCGGAC
GTACATGGCT ATAAATCCAG CGAAATGCTT TACAACTGGG TAGCAAAAGA CGTTGAACCG
CCAAAATTTA CCGAAGTTAC CGACGTGGTA CTGATCACGC GTGACAACTT TAAAGAAGAA
CTGGAGAAAA AAGGTTTAGG CGGTAAGTAA
 
Protein sequence
MHKFTKALAA IGLAAVMSQS AMAENLKLGF LVKQPEEPWF QTEWKFADKA GKDLGFEVIK 
IAVPDGEKTL NAIDSLAASG AKGFVICTPD PKLGSAIVAK ARGYDMKVIA VDDQFVNAKG
KPMDTVPLVM MAATKIGERQ GQELYKEMQK RGWDVKESAV MAITANELDT ARRRTTGSMD
ALKAAGFPEK QIYQVPTKSN DIPGAFDAAN SMLVQHPEVK HWLIVGMNDS TVLGGVRATE
GQGFKAADII GIGINGVDAV SELSKAQATG FYGSLLPSPD VHGYKSSEML YNWVAKDVEP
PKFTEVTDVV LITRDNFKEE LEKKGLGGK