Gene EcolC_1728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1728 
Symbol 
ID6067082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1925071 
End bp1925736 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content54% 
IMG OID641601143 
Producthypothetical protein 
Protein accessionYP_001724705 
Protein GI170019751 
COG category[R] General function prediction only 
COG ID[COG3318] Predicted metal-binding protein related to the C-terminal domain of SecA 
TIGRFAM ID[TIGR02292] yecA family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000258214 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGG GACCGTTAAA CGAAAGTGAG TTGGAATGGC TGGACGATAT TCTGACCAAA 
TACAACACTG ACCACGCCAT CCTTGATGTG GCGGAGCTGG ACGGTTTATT GACGGCGGTG
TTGAGTTCTC CGCAAGAGAT TGAACCGGAA CAGTGGCTGG TTGCCGTGTG GGGTGGGGCT
GACTATGTGC CGCGCTGGGC GTCAGAGAAA GAGATGACGC GCTTTATGAA CCTGGCCTTT
CAACATATGG CCGATACCGC AGAGCGTCTG AACGAATTCC CGGAGCAGTT TGAGCCGTTA
TTCGGCTTGC GAGAAGTCGA TGGCAGCGAG CTGACGATTG TTGAGGAGTG GTGCTTTGGC
TATATGCGGG GCGTGGCACT TTCTGACTGG TCAACGTTGC CCGATTCGTT AAAACCAGCG
CTGGAGGCGA TTGCGCTGCA CGGTACTGAG GAAAACTTCG AGCGGGTAGA GAAGATGTCG
CCAGAAGCGT TTGAAGAGAG CGTAGATGCC ATTCGACTGG CGGCGCTTGA TCTACATGCG
TACTGGATGG CGCATCCGCA GGAAAAAGCT GTTCAGCAAC CGATCAAAGC AGAAGAGAAA
CCGGGGCGTA ACGATCCTTG CCCGTGCGGT AGTGGTAAGA AATTTAAGCA GTGCTGCCTG
CATTAA
 
Protein sequence
MKTGPLNESE LEWLDDILTK YNTDHAILDV AELDGLLTAV LSSPQEIEPE QWLVAVWGGA 
DYVPRWASEK EMTRFMNLAF QHMADTAERL NEFPEQFEPL FGLREVDGSE LTIVEEWCFG
YMRGVALSDW STLPDSLKPA LEAIALHGTE ENFERVEKMS PEAFEESVDA IRLAALDLHA
YWMAHPQEKA VQQPIKAEEK PGRNDPCPCG SGKKFKQCCL H