Gene EcolC_1726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1726 
SymboluvrC 
ID6067201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1921985 
End bp1923817 
Gene Length1833 bp 
Protein Length610 aa 
Translation table11 
GC content52% 
IMG OID641601138 
Productexcinuclease ABC subunit C 
Protein accessionYP_001724703 
Protein GI170019749 
COG category[L] Replication, recombination and repair 
COG ID[COG0322] Nuclease subunit of the excinuclease complex 
TIGRFAM ID[TIGR00194] excinuclease ABC, C subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000100265 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGATC AGTTTGACGC AAAAGCGTTT TTAAAAACCG TAACCAGCCA GCCAGGCGTT 
TATCGCATGT ACGATGCTGG TGGTACGGTT ATCTATGTCG GCAAAGCGAA AGACCTGAAA
AAACGGCTTT CCAGCTATTT CCGTAGCAAC CTCGCTTCGC GCAAAACCGA AGCGCTGGTC
GCCCAGATCC AGCAAATTGA TGTAACGGTT ACTCATACAG AAACCGAAGC GCTGTTGCTG
GAACACAACT ACATCAAACT CTATCAGCCG CGTTACAACG TTTTACTACG CGATGATAAA
TCTTATCCCT TTATCTTCCT GAGTGGCGAT ACCCATCCGC GTCTGGCGAT GCATCGTGGT
GCGAAGCATG CTAAAGGTGA ATATTTCGGC CCGTTCCCGA ATGGCTATGC CGTACGTGAA
ACACTGGCGC TACTGCAAAA GATTTTCCCC ATTCGCCAGT GCGAAAACAG TGTTTATCGC
AATCGCTCGC GTCCGTGTCT GCAATATCAG ATAGGACGTT GTCTGGGGCC GTGCGTTGAA
GGACTGGTGA GTGAAGAAGA ATACGCTCAG CAGGTCGAGT ATGTGCGCCT GTTTTTGTCT
GGCAAAGATG ATCAGGTGCT TACGCAACTG ATTAGCCGTA TGGAAACTGC CAGCCAGAAT
CTGGAGTTTG AAGAAGCTGC ACGTATTCGC GACCAAATTC AGGCGGTGCG ACGCGTCACC
GAAAAACAGT TTGTTTCCAA TACCGGCGAC GACCTTGACG TTATTGGTGT GGCGTTCGAT
GCGGGCATGG CTTGTGTCCA CGTATTGTTC ATTCGTCAGG GCAAAGTGCT CGGCAGCCGC
AGCTATTTCC CGAAAGTGCC TGGCGGTACG GAACTGAGCG AGGTGGTGGA AACCTTCGTA
GGTCAGTTCT ATTTACAAGG CAGCCAGATG CGCACCTTAC CGGGTGAGAT CCTGCTCGAT
TTTAATCTTA GCGATAAAAC GCTGCTCGCC GATTCCCTTT CAGAACTGGC GGGACGCAAG
ATTAATGTTC AAACCAAACC TCGCGGCGAT AGGGCGCGTT ATCTGAAACT CGCGCGCACC
AATGCGGCGA CGGCCTTAAC CAGCAAACTT TCGCAGCAAT CTACCGTTCA CCAGCGGCTT
ACAGCACTTG CCAGTGTGTT GAAATTGCCG GAAGTGAAGC GGATGGAGTG CTTTGACATC
AGCCATACCA TGGGTGAACA AACCGTCGCT TCCTGTGTGG TGTTTGATGC TAACGGCCCG
CTGCGTGCGG AGTATCGGCG CTATAACATT ACTGGCATCA CGCCGGGCGA TGATTATGCG
GCGATGAATC AGGTGCTGCG TCGGCGTTAT GGTAAAGCCA TCGACGACAG TAAGATCCCG
GATGTGATAC TTATCGACGG CGGCAAAGGC CAGCTTGCGC AGGCGAAAAA TGTCTTCGCC
GAACTGGATG TCTCATGGGA TAAAAATCAT CCGCTGCTAC TTGGCGTTGC CAAAGGAGTA
GATCGTAAGG CTGGGCTGGA AACGCTGTTC TTTGAGCCGG AAGGTGAGGG ATTCAGTTTG
CCGCCAGATT CTCCCGCGCT GCATGTTATC CAGCATATTC GCGATGAATC ACACGATCAC
GCGATTGGCG GGCACCGTAA AAAACGGGCG AAGGTCAAAA ATACCAGTTC CCTGGAAACC
ATTGAAGGCG TCGGGCCAAA ACGCCGGCAA ATGTTGTTGA AATATATGGG CGGTTTGCAA
GGTTTACGTA ACGCCAGCGT CGAGGAAATT GCAAAAGTGC CGGGTATTTC GCAAGGTCTG
GCAGAAAAGA TCTTCTGGTC GTTGAAACAT TGA
 
Protein sequence
MSDQFDAKAF LKTVTSQPGV YRMYDAGGTV IYVGKAKDLK KRLSSYFRSN LASRKTEALV 
AQIQQIDVTV THTETEALLL EHNYIKLYQP RYNVLLRDDK SYPFIFLSGD THPRLAMHRG
AKHAKGEYFG PFPNGYAVRE TLALLQKIFP IRQCENSVYR NRSRPCLQYQ IGRCLGPCVE
GLVSEEEYAQ QVEYVRLFLS GKDDQVLTQL ISRMETASQN LEFEEAARIR DQIQAVRRVT
EKQFVSNTGD DLDVIGVAFD AGMACVHVLF IRQGKVLGSR SYFPKVPGGT ELSEVVETFV
GQFYLQGSQM RTLPGEILLD FNLSDKTLLA DSLSELAGRK INVQTKPRGD RARYLKLART
NAATALTSKL SQQSTVHQRL TALASVLKLP EVKRMECFDI SHTMGEQTVA SCVVFDANGP
LRAEYRRYNI TGITPGDDYA AMNQVLRRRY GKAIDDSKIP DVILIDGGKG QLAQAKNVFA
ELDVSWDKNH PLLLGVAKGV DRKAGLETLF FEPEGEGFSL PPDSPALHVI QHIRDESHDH
AIGGHRKKRA KVKNTSSLET IEGVGPKRRQ MLLKYMGGLQ GLRNASVEEI AKVPGISQGL
AEKIFWSLKH