| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1721 |
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| Symbol | |
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| ID | 6066856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 1918212 |
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| End bp | 1918880 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641601133 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001724698 |
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| Protein GI | 170019744 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.796808 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAGAAA GTATACAACT GGTTATTGAT TCCTTGCCGT TCCTGCTGAA AGGTGCTGGG
TATACGCTGC AACTCAGTAT CGGCGGCATG TTTTTTGGCT TACTGCTCGG GTTTATTCTC
GCGCTGATGC GCCTGTCGCC AATCTGGCCC GTGCGCTGGC TGGCGCGTTT TTATATCTCT
ATTTTTCGTG GTACGCCGCT CATCGCACAA CTGTTTATGA TCTATTACGG CCTGCCGCAG
TTTGGTATCG AATTAGATCC CATTCCGTCA GCAATGATTG GTCTGTCGTT GAACACTGCC
GCCTATGCTG CCGAAACGCT GCGCGCCGCC ATTTCTTCTA TTGATAAAGG TCAGTGGGAA
GCGGCAGCCA GTATTGGTAT GACGCCGTGG CAGACCATGC GTCGCGCGAT TTTGCCACAG
GCGGCGCGTG TGGCGTTGCC GCCGCTGTCG AACAGCTTTA TCAGCCTGGT AAAAGATACG
TCGCTGGCCG CGACAATCCA GGTGCCGGAG CTGTTCCGTC AGGCGCAGTT GATTACCTCG
CGCACGCTGG AGGTGTTCAC CATGTACCTG GCGGCTTCGC TCATCTACTG GATCATGGCG
ACAGTATTAT CGACGTTGCA GAACCATTTT GAGAATCAAC TTAATCGCCA GGAGAGAGAA
CCAAAATGA
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| Protein sequence | MQESIQLVID SLPFLLKGAG YTLQLSIGGM FFGLLLGFIL ALMRLSPIWP VRWLARFYIS
IFRGTPLIAQ LFMIYYGLPQ FGIELDPIPS AMIGLSLNTA AYAAETLRAA ISSIDKGQWE
AAASIGMTPW QTMRRAILPQ AARVALPPLS NSFISLVKDT SLAATIQVPE LFRQAQLITS
RTLEVFTMYL AASLIYWIMA TVLSTLQNHF ENQLNRQERE PK
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