Gene EcolC_1708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1708 
Symbol 
ID6066853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1905980 
End bp1906651 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content52% 
IMG OID641601120 
Producthypothetical protein 
Protein accessionYP_001724685 
Protein GI170019731 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0871629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGGAC GCTTTGCCCA ATCCCAAACG CGTGAAGATT ACCTTGCGCT TCTCGCGGAA 
GATATTGAAC GCGATATACC CTACGATCCC GAACCCATTG GCAGATACAA CGTCGCGCCG
GGAACCAAAG TTCTTCTGCT CAGTGAACGT GATGAACACC TTCATCTGGA TCCGGTTTTC
TGGGGATATG CTCCCGGATG GTGGGATAAA CCGCCGCTGA TTAACGCCCG CGTAGAAACT
GCGGCCACCA GTCGTATGTT TAAACCGCTC TGGCAACATG GTCGGGCAAT CTGTTTTGCC
GATGGCTGGT TTGAGTGGAA AAAAGAAGGC GACAAAAAAC AGCCTTATTT TATCTATCGC
GCTGATGGAC AACCTGTTTT TATGGCCGCG ATAGGTAGCA CACCGTTTGA GCGTGGTGAC
GAAGCCGAAG GATTTTTAAT TGTCACTGCA GCAGCAGACC AGGGTCTGGT AGATATTCAT
GACCGCCGCC CGCTGGTACT GTCGCCAGAA GCTGCGCGGG AATGGATGCG GCAAGAGATT
AGCGGTAAAG AAGCCTCAGA AATCGCGGTC AGTGGTTGTG TGCCAGCAAA GCAGTTCTCC
TGGCATCCGG TATTGCGCGC GGTGGGTAAT GTCAAAAACC AGGGCGCAGC GTTAATTCAA
CCTGTCTGTT AA
 
Protein sequence
MCGRFAQSQT REDYLALLAE DIERDIPYDP EPIGRYNVAP GTKVLLLSER DEHLHLDPVF 
WGYAPGWWDK PPLINARVET AATSRMFKPL WQHGRAICFA DGWFEWKKEG DKKQPYFIYR
ADGQPVFMAA IGSTPFERGD EAEGFLIVTA AADQGLVDIH DRRPLVLSPE AAREWMRQEI
SGKEASEIAV SGCVPAKQFS WHPVLRAVGN VKNQGAALIQ PVC