Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1694 |
Symbol | fliP |
ID | 6066908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 1894513 |
End bp | 1895250 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641601108 |
Product | flagellar biosynthesis protein FliP |
Protein accession | YP_001724673 |
Protein GI | 170019719 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1338] Flagellar biosynthesis pathway, component FliP |
TIGRFAM ID | [TIGR01103] flagellar biosynthetic protein FliP |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00403809 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.027037 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCGTT TGTTGTCTGT CGCACCTGTC CTTCTCTGGC TGGTTACGCC CCTCGCCTTC GCGCAACTGC CGGGTATCAC CAGCCAGCCG CTGCCTGGCG GTGGACAAAG CTGGTCGCTC CCGGTGCAGA CGCTGGTGTT CATCACCTCG TTGACGTTTA TTCCGGCAAT TTTACTGATG ATGACCAGTT TCACCCGCAT CATCATTGTT TTTGGTTTAT TGCGTAACGC GCTGGGAACG CCCTCCGCGC CACCTAACCA GGTATTGCTG GGGCTGGCAC TATTTTTGAC CTTTTTTATT ATGTCACCGG TGATCGATAA AATTTATGTC GATGCGTACC AGCCATTCAG CGAAGAGAAA ATATCAATGC AGGAGGCGCT GGAAAAAGGG GCGCAGCCGC TACGTGAGTT TATGCTGCGT CAGACCCGTG AGGCAGATTT AGGGTTGTTT GCCAGACTAG CGAATACCGG CCCGTTGCAG GGACCTGAAG CCGTGCCGAT GCGCATTTTG CTTCCGGCCT ACGTGACCAG CGAGTTGAAA ACCGCATTTC AGATAGGCTT CACGATTTTC ATTCCTTTTT TGATTATCGA CCTGGTGATT GCCAGCGTGT TGATGGCATT GGGGATGATG ATGGTCCCCC CCGCCACCAT TGCTCTGCCC TTTAAACTGA TGCTGTTTGT ACTGGTGGAT GGCTGGCAAT TGCTGGTCGG TTCGCTGGCG CAGAGCTTTT ACAGCTAG
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Protein sequence | MRRLLSVAPV LLWLVTPLAF AQLPGITSQP LPGGGQSWSL PVQTLVFITS LTFIPAILLM MTSFTRIIIV FGLLRNALGT PSAPPNQVLL GLALFLTFFI MSPVIDKIYV DAYQPFSEEK ISMQEALEKG AQPLREFMLR QTREADLGLF ARLANTGPLQ GPEAVPMRIL LPAYVTSELK TAFQIGFTIF IPFLIIDLVI ASVLMALGMM MVPPATIALP FKLMLFVLVD GWQLLVGSLA QSFYS
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