| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1687 |
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| Symbol | |
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| ID | 6065583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 1889101 |
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| End bp | 1890795 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641601101 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001724666 |
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| Protein GI | 170019712 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0356503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00372154 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCAGCACG AGACAAAAAT GGAAAACCAG AGCTGGTTGA AAAAACTCGC ACGCCGCCTG
GGGCCTGGTC ATGTCGTTAA TCTCTGCTTT ATCGTGGTAT TGCTTTTTTC CACCTTGCTC
ACCTGGCGTG AAGTAGTGGT GCTGGAAGAT GCCTATATCT CCAGCCAGCG TAATCATCTG
GAAAACGTAG CCAACGCGCT CGATAAGCAT TTGCAGTATA ACGTCGACAA ACTGATCTTT
TTGCGTAATG GCATGCGCGA AGCTCTCGTA GCGCCACTGG ATTTCACTTC ACTGCGTAAT
GCTGTAACCG AGTTCGAACA GCATCGCGAC GAGCACGCCT GGCAAATTGA ACTCAACCGA
CGACGCACCC TGTCAGTCAA TGGCGTATCG GATGCATTAG TCAGCGAGGG GAATCTCCTG
TCTCGCGAAA ATGAAAGCCT CGACAATGAA ATTACCGCTG CACTGGAAGT TGGTTACTTG
CTGCGACTGG CGCACAACAC CTCGTCGATG GTTGAACAGG CGATGTATGT CTCGCGTGCC
GGATTTTACG TTTCGACGCA GCCGACCTTG TTTACGCGCA ATGTACCAAC GCGTTATTAC
GGCTATGTCA CCCAACCCTG GTTTATCGGC CATTCGCAAC GAGAAAATCG TCACCGCGCG
GTACGCTGGT TTACTTCGCA ACCGGAACAC GCCAGCAATA CTGAACCGCA GGTTACCGTC
AGTGTTCCGG TAGACAGTAA TAACTACTGG TATGGCGTGC TGGGGATGAG TATTCCCGTG
CGTACCATGC AGCAATTTTT AAGAAACGCC ATCGATAAAA ACCTCGATGG TGAGTATCAG
CTCTATGACA GTAAGCTGAG ATTTTTGACC TCTTCCAATC CTGATCATCC AACAGGGAAT
ATTTTTGATC CTCGTGAACT GGCCTTGCTG GCGCAGGCAA TGGAACATGA CACGCGGGGC
GGCATTCGTA TGGACAGTCG CTATGTTAGT TGGGAACGTC TGGACCATTT CGACGGTGTG
CTGGTGCGCG TCCATACGCT AAGCGAAGGC GTGCGCGGCG ATTTCGGCAG TATCAGCATT
GCATTAACCC TGCTGTGGGC GCTCTTTACC ACCATGTTAC TCATCTCCTG GTATGTGATT
CGCCGGATGG TCAGCAACAT GTATGTTCTG CAAAGCTCGT TGCAGTGGCA GGCGTGGCAC
GACACCTTAA CGCGTTTATA TAACCGTGGC GCACTGTTCG AAAAAGCCCG TCCGCTCGCG
AAAATGTGTC AGACGCACCA ACATCCTTTT TCTGTCATTC AGGTCGATCT TGACCATTTC
AAAGCGATTA ATGACCGCTT TGGTCATCAG GCGGGCGACC GTGTTCTTTC TCATGCTGCC
GGATTAATTA GCAGTTCCTT GCGTGCGCAG GACGTTGCCG GGCGGGTCGG TGGTGAGGAG
TTTTGTGTGA TTCTGCCAGG CGCGAGTCTG ACGGAGGCTG CGGAAGTCGC AGAACGTATT
CGCCTGAAGT TAAATGAAAA AGAGATGTTG ATTGCTAAGA GTACGACGAT ACGCATCAGT
GCCTCGTTGG GGGTAAGTAG CAGCGAGGAA ACCGGTGATT ATGATTTTGA ACAACTCCAG
TCACTGGCTG ACCGTCGGCT TTATCTCGCT AAACAGGCCG GGCGTAATCG GGTATGCGCG
AGCGATAACG CTTAA
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| Protein sequence | MQHETKMENQ SWLKKLARRL GPGHVVNLCF IVVLLFSTLL TWREVVVLED AYISSQRNHL
ENVANALDKH LQYNVDKLIF LRNGMREALV APLDFTSLRN AVTEFEQHRD EHAWQIELNR
RRTLSVNGVS DALVSEGNLL SRENESLDNE ITAALEVGYL LRLAHNTSSM VEQAMYVSRA
GFYVSTQPTL FTRNVPTRYY GYVTQPWFIG HSQRENRHRA VRWFTSQPEH ASNTEPQVTV
SVPVDSNNYW YGVLGMSIPV RTMQQFLRNA IDKNLDGEYQ LYDSKLRFLT SSNPDHPTGN
IFDPRELALL AQAMEHDTRG GIRMDSRYVS WERLDHFDGV LVRVHTLSEG VRGDFGSISI
ALTLLWALFT TMLLISWYVI RRMVSNMYVL QSSLQWQAWH DTLTRLYNRG ALFEKARPLA
KMCQTHQHPF SVIQVDLDHF KAINDRFGHQ AGDRVLSHAA GLISSSLRAQ DVAGRVGGEE
FCVILPGASL TEAAEVAERI RLKLNEKEML IAKSTTIRIS ASLGVSSSEE TGDYDFEQLQ
SLADRRLYLA KQAGRNRVCA SDNA
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