Gene EcolC_1672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1672 
Symbol 
ID6066765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1875144 
End bp1875815 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content39% 
IMG OID641601086 
Producthypothetical protein 
Protein accessionYP_001724651 
Protein GI170019697 
COG category[R] General function prediction only 
COG ID[COG3443] Predicted periplasmic or secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00489307 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.127263 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTGG AGGAAACTGT TTTGGCGATT CGTCTTCACA AACTGGCTGT TGCTTTAGGT 
GTCTTTATTG TTAGCGCTCC TGCCTTTTCG CATGGTCATC ACTCACACGG CAAACCCTTA
ACAGAGGTCG AACAAAAAGC TGCTAATGGT GTTTTTGATG ATGCCAATGT ACAAAACCGA
ACGCTCAGTG ACTGGGATGG AGTCTGGCAA TCCGTTTATC CTTTACTGCA AAGTGGCAAA
CTTGACCCCG TCTTTCAGAA GAAAGCGGAT GCAGATAAAA CTAAAACATT TGCTGAAATT
AAAGATTATT ATCACAAAGG TTATGCAACA GATATCGAGA TGATTGGCAT TGAGGACGGC
ATTGTTGAAT TCCATAGAAA TAATGAAACA ACATCCTGTA AATATGATTA CGATGGATAC
AAAATACTCA CCTATAAATC AGGCAAGAAA GGCGTTCGTT ACTTATTCGA ATGTAAAGAT
CCTGAAAGCA AAGCCCCTAA ATATATACAA TTTAGCGATC ATATAATTGC ACCACGAAAA
TCATCTCATT TTCACATTTT TATGGGTAAT GATTCACAGC AATCTTTATT AAATGAAATG
GAAAACTGGC CAACGTATTA TCCATATCAG TTGAGTAGCG AAGAAGTGGT CGAGGAAATG
ATGTCTCATT GA
 
Protein sequence
MTLEETVLAI RLHKLAVALG VFIVSAPAFS HGHHSHGKPL TEVEQKAANG VFDDANVQNR 
TLSDWDGVWQ SVYPLLQSGK LDPVFQKKAD ADKTKTFAEI KDYYHKGYAT DIEMIGIEDG
IVEFHRNNET TSCKYDYDGY KILTYKSGKK GVRYLFECKD PESKAPKYIQ FSDHIIAPRK
SSHFHIFMGN DSQQSLLNEM ENWPTYYPYQ LSSEEVVEEM MSH