Gene EcolC_1648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1648 
Symbol 
ID6064848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand+ 
Start bp1827085 
End bp1827729 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content37% 
IMG OID641601062 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_001724632 
Protein GI170019678 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones5 
Fosmid unclonability p-value0.000298964 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAAAAA TATTACCTTC TATATTTGGC GCGGATATTT TACGCCTGAA AGATGAAATT 
CATTTTCTGG AAGAGGAACA AACCGAAATA TTGCACGTTG ATTTAATGGA TGGCACTTAT 
GTCAGTAATA TTGCCTTTGG CCCAAATCAA ATAGCAGCAA TGAAAAAAGC CAGTTCGATG 
ATCTTTGACG TGCACATGAT GCTGGCAAAT CCTGAGCGAC ATATTGATGA TGTAATCAAT 
ACCGGGGCGG AGATGATTTC TGTACATTAT GAATCGACGC CACATGTACA TTATATTATT 
CAAAAAATCA AAAAGGCGGG TCGCAAAGCA GGTGTTGTGC TTAATCCGGG GACACCTGAA 
TCTGTAATCG AATATTTATT AGATGATATT GATTATATAT TGTTAATGAC AATTAACCCA 
GGGCAACCAG GCCAGACATT TATTCATAAA AGTCTGGAGA AAATCCGTAA TACCAAAAAA 
ATGATATCTG GCAAAGATAT TCAAATTGAA GTGGATGGTG GCGTTAATCT TGATAATGTA 
AAACAAGTTA AAGAAGCAGG GGCTGACCTT ATTGTTGTTG GTGGTGCCTT ATTTAACAAA 
CAGCCTCGTG AAAGTTATCA GGCATTAAAA ATCGCTGTTC AGTGA
 
Protein sequence
MAKILPSIFG ADILRLKDEI HFLEEEQTEI LHVDLMDGTY VSNIAFGPNQ IAAMKKASSM 
IFDVHMMLAN PERHIDDVIN TGAEMISVHY ESTPHVHYII QKIKKAGRKA GVVLNPGTPE 
SVIEYLLDDI DYILLMTINP GQPGQTFIHK SLEKIRNTKK MISGKDIQIE VDGGVNLDNV 
KQVKEAGADL IVVGGALFNK QPRESYQALK IAVQ