Gene EcolC_1645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1645 
Symbol 
ID6065115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1825033 
End bp1825476 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content42% 
IMG OID641601059 
Productputative PTS IIA-like nitrogen-regulatory protein PtsN 
Protein accessionYP_001724629 
Protein GI170019675 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000320453 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATATCGA TCAGTGTTGC CGATGGTGCG GGACTGCAGA ATTACGATGC CGTGCTTGAG 
CATATTTTTA ACACGCACTG TACAACGAAT ACGGTGAAAG AGAGCTGGCT CAATGCTATG
CGTAAACGCG AAGCGGAATA TCCGACAGGA ATAGAACTGG AAGGTTATTC TATCGCTATA
CCACACTGTG ATAGTGAACA TGCGAATCAA CCTGCTATTT ATATCATCCG TCTGCCAGAC
GCAATACCTG TGAACAGGGC TGATGAAGAT GGAATATTGT GGGTCAGACT CGTCGTTAAT
CTTATTGTTA CGGATCCTGC TGACCAGCTT CGATTGTTAA AGTCATTATT TAACCATCTC
CAAAATGAAG AATTTTACCA AAACTTACTG ACACTTCCCG TCGATGATGC AAAAGCACTT
TTTGTATCCA AAATAATCCA ATAG
 
Protein sequence
MISISVADGA GLQNYDAVLE HIFNTHCTTN TVKESWLNAM RKREAEYPTG IELEGYSIAI 
PHCDSEHANQ PAIYIIRLPD AIPVNRADED GILWVRLVVN LIVTDPADQL RLLKSLFNHL
QNEEFYQNLL TLPVDDAKAL FVSKIIQ