| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1644 |
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| Symbol | |
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| ID | 6065120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 1823950 |
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| End bp | 1824705 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641601058 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_001724628 |
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| Protein GI | 170019674 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000364234 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTATCTGG TTGATGAAAG GCGAAAGTTA ATACTTGAAG ACTTAATGTC GGCAGGTACG
GTCTATGTCA GTGATCTTGC ACGAAAGTAT GAAGTAACGT ATGAGACCAT CAGGAAAGAT
TTGACCCATC TTGAACAAAA AGGGCTGCTG ATCAAAAGCC ATGGTGGGGC TACTTTAAAG
CAAAGGGCCA TAGAGCATCC CTTTCAGGTC AGGGAAAAAG AAAATAACTC TTATAAGAAG
GCGATAGCTC GTAAAGCGCT TGATTTCATT CCACCTAATA GTTCGATGAT TATCGGTACG
GGCAGTACCA CTTTTGAGCT GGCTAACCTG TTATGTATGA AGTCTGGGTT TAAAATCTTC
ACAGATTCGC TCCCCGTTGC CAGTGTGTTG ATTGAATCTG ACAATCAGGT TTTTCTCTTT
GGCGGCGAAC TGCGTAGAAA GAGTTCCTCA GTGTTTGGGG GGTGGGCGGT ATCTATGATC
AACGATATAC ATGTTGATCT CTGTTTTATT GGAACCGACG GCTTTAGTAA CATGACTGGT
CCATCGACGC CTTCTTCTTC TGATGCGTTT TTGGATCGTA CGATAATTTC GCACTCAGAC
AAAAAATATA TCCTCGGTGA TTACACCAAG TTTGAGCGCA GCAGTTTGTT TAAGATCTGC
GACTGGTCGG AGATCACCGC CCTTATAACC AACGATCATG CCGACAAAGA GGGGATTGCC
GAAGTCGCAA AATACACGTC AGTAATAACC TGTTAG
|
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| Protein sequence | MYLVDERRKL ILEDLMSAGT VYVSDLARKY EVTYETIRKD LTHLEQKGLL IKSHGGATLK
QRAIEHPFQV REKENNSYKK AIARKALDFI PPNSSMIIGT GSTTFELANL LCMKSGFKIF
TDSLPVASVL IESDNQVFLF GGELRRKSSS VFGGWAVSMI NDIHVDLCFI GTDGFSNMTG
PSTPSSSDAF LDRTIISHSD KKYILGDYTK FERSSLFKIC DWSEITALIT NDHADKEGIA
EVAKYTSVIT C
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