Gene EcolC_1627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1627 
Symbol 
ID6065324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1809406 
End bp1810464 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content51% 
IMG OID641601042 
Productprotein of unknown function DUF395 YeeE/YedE 
Protein accessionYP_001724612 
Protein GI170019658 
COG category[R] General function prediction only 
COG ID[COG2391] Predicted transporter component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.275433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCAA TGATATTAAG CGGGCTAATT TGTGGTGCTC TGCTGGGATT TGTCATGCAG 
CGTGGGCGTT TTTGCCTGAC TGGTGGTTTT CGCGATATGT ATATCGCGAA AAATAATCGC
ATGTTTTATG CCCTGCTGAT TGCAATTTCG GTACAAAGCG TGGGGGTTTT TGCGTTAATT
CAGGCGGGCC TACTGACTTA CGAAGCCGGG GCGTTCCCGT GGCTTGGTAC TGTTATAGGT
GGGTATATCT TCGGGCTGGG AATTGTTCTG GCGGGTGGAT GTGCCACCGG GACCTGGTAT
CGCGCGGGGG AGGGATTGAT CGGCAGTTGG ATCGCGCTTT TCACTTATAT GGTGATGAGT
GCGGTGATGC GTTCTCCACA TGCCAGTGGT TTAAATCAAA CCTTGCAGCA CTACAGTACT
GAACATAACT CTATTGCTGA GACTTTTAAT TTGTCTGTGT GGCCGTTGGT TACCGTTTTG
CTGGTGATAA CGCTCTGGGT GGTGATGAAA GAGTTGAAGA AGCCAAAACT CAAAGTCGCG
ACCTTACCGC CGCGCCGAAC CGGGATCGCT CATATTCTGT TTGAAAAACG CTGGCATCCC
TTTGTCACTG CTGTACTCAT CGGTTTGATT GCGCTTTTAG CCTGGCCCCT GAGTGAAGCA
ACCGGACGCA TGTTTGGGTT AGGAATCACT TCCCCAACGG CCAATATTCT GCAATTTCTG
GTCGCGGGTG ACGTGAAATA CATTAACTGG GGCGTTTTCC TGGTGTTAGG GATCTTCGTG
GGGTCATTTA TTGCAGCCAA AGGGAGCCGT GAGTTCCGCG TTCGCGCAGC TGATGCACAA
ACAACATTAC GTAGCGGGTT AGGTGGTGTA CTGATGGGCT TCGGTGCCAG TATTGCAGGT
GGTTGCTCTA TCGGTAATGG ACTGGTTATG ACTGCAATGA TGACCTGGCA GGGCTGGGTT
GGCCTTGTAT TTATGATTCT CGGTGTCTGG ACTGCGTCCT GGCTTGTGTA TGTTCGACCG
CAGCGTAAGG CGCGACTGGC GACTGCTGCG GCAAATTAA
 
Protein sequence
MFSMILSGLI CGALLGFVMQ RGRFCLTGGF RDMYIAKNNR MFYALLIAIS VQSVGVFALI 
QAGLLTYEAG AFPWLGTVIG GYIFGLGIVL AGGCATGTWY RAGEGLIGSW IALFTYMVMS
AVMRSPHASG LNQTLQHYST EHNSIAETFN LSVWPLVTVL LVITLWVVMK ELKKPKLKVA
TLPPRRTGIA HILFEKRWHP FVTAVLIGLI ALLAWPLSEA TGRMFGLGIT SPTANILQFL
VAGDVKYINW GVFLVLGIFV GSFIAAKGSR EFRVRAADAQ TTLRSGLGGV LMGFGASIAG
GCSIGNGLVM TAMMTWQGWV GLVFMILGVW TASWLVYVRP QRKARLATAA AN