| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1625 |
|---|
| Symbol | |
|---|
| ID | 6065880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 1806673 |
|---|
| End bp | 1807602 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641601040 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001724610 |
|---|
| Protein GI | 170019656 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.27656 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCAC TGCTGGATGT GTTGATGATC CTCGATGCCT TAGAAAAAGA AGGCAGTTTT
GCGGCGGCGT CGGCCAAACT CTACAAGACG CCGTCCGCTC TGAGTTACAC CGTTCACAAG
CTGGAAAGCG ACCTTAATAT TCAATTGCTT GATCGTAGCG GTCACCGCGC TAAATTCACC
CGCACCGGAA AAATGTTATT AGAGAAAGGG CGGGAAGTTC TGCATACCGT GCGGGAACTG
GAAAAGCAGG CGATCAAACT GCATGAAGGC TGGGAAAACG AGCTGGTGAT TGGCGTGGAC
GACACGTTTC CTTTTTCTCT GCTTGCGCCA CTGATTGAAG CTTTTTATCA ACATCATAGC
GTGACGCGCC TGAAGTTTAT CAATGGCGTA CTCGGTGGTT CCTGGGATGC CCTGACTCAG
GGGCGAGCAG ATATTATTGT TGGCGCGATG CATGAGCCAC CATCTTCCAG TGAGTTTGGT
TTTTCACGGT TGGGCGATCT GGAACAAGTC TTTGCGGTCG CGCCTCATCA TCCGTTAGCC
CTGGAAGAAG AGCCGTTAAA CCGTCGTATT ATTAAGCGAT ATCGGGCGAT TGTGGTGGGG
GATACTGCGC AGGCAGGCGC TTCTACGGCC TCACAACTTC TCGACGAACA AGAAGCCATT
ACCGTTTTCG ATTTTAAAAC CAAGCTGGAG CTGCAAATTA GCGGCCTCGG CTGCGGCTAT
TTACCCCGTT ATCTGGCGCA ACGGTTTCTC GATAGTGGCG CGTTAATCGA GAAGAAAGTG
GTCGCCCAAA CTCTCTTTGA ACCCGTCTGG ATTGGCTGGA ACGAACAGAC CGCAGGCCTT
GCCAGCGGCT GGTGGCGAGA TGAAATTTTA GCAAATAGTG CGATCGCCGG TGTTTATGCA
AAATCTGATG ACGGAAAATC AGCCATTTAA
|
|---|
| Protein sequence | MKPLLDVLMI LDALEKEGSF AAASAKLYKT PSALSYTVHK LESDLNIQLL DRSGHRAKFT
RTGKMLLEKG REVLHTVREL EKQAIKLHEG WENELVIGVD DTFPFSLLAP LIEAFYQHHS
VTRLKFINGV LGGSWDALTQ GRADIIVGAM HEPPSSSEFG FSRLGDLEQV FAVAPHHPLA
LEEEPLNRRI IKRYRAIVVG DTAQAGASTA SQLLDEQEAI TVFDFKTKLE LQISGLGCGY
LPRYLAQRFL DSGALIEKKV VAQTLFEPVW IGWNEQTAGL ASGWWRDEIL ANSAIAGVYA
KSDDGKSAI
|
|---|
| |