| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1622 |
|---|
| Symbol | hisD |
|---|
| ID | 6066383 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 1802973 |
|---|
| End bp | 1804277 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641601037 |
|---|
| Product | histidinol dehydrogenase |
|---|
| Protein accession | YP_001724607 |
|---|
| Protein GI | 170019653 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0141] Histidinol dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.426183 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTTA ACACAATCAT TGACTGGAAT AGCTGTACTG CGGAGCAACA ACGCCAGCTG
TTAATGCGCC CGGCGATCTC CGCTTCTGAA AGCATTACCC GCACCGTTAA CGATATTCTC
GATAACGTGA AAGCACGCGG CGATGACGCC CTGCGGGAAT ACAGCGCAAA GTTTGATAAA
ACCACGGTTA CCGCGCTGAA GGTGTCTGCT GAGGAGATCG CCGCCGCCAG CGAACGCCTT
AGCGACGAGC TAAAACAGGC GATGGCGGTG GCAGTAAAAA ATATTGAAAC CTTCCACACT
GCGCAAAAAC TGCCGCCGGT AGATGTAGAA ACCCAGCCAG GCGTGCGTTG CCAGCAGGTC
ACGCGCCCAG TCGCTTCAGT TGGGTTGTAT ATTCCTGGCG GCTCCGCCCC GCTCTTCTCA
ACGGTATTAA TGCTGGCAAC TCCGGCGCGT ATTGCGGGCT GTAAAAAAGT GGTGCTGTGC
TCACCGCCGC CGATTGCCGA TGAGATCCTT TACGCGGCGC AGCTGTGCGG TGTACAGGAC
GTGTTTAACG TCGGCGGCGC ACAGGCCATT GCCGCACTGG CGTTTGGTAC GGAATCTGTG
CCGAAAGTGG ACAAAATCTT CGGGCCGGGT AACGCCTTTG TCACCGAAGC GAAACGTCAG
GTGAGCCAGC GTCTGGACGG TGCGGCGATC GATATGCCCG CAGGCCCGTC GGAAGTGCTG
GTGATTGCTG ACAGCGGCGC TACGCCGGAT TTCGTGGCTT CTGATTTGCT TTCTCAGGCT
GAACACGGCC CGGACTCACA GGTGATTTTA CTGACGCCCG CTGCTGATAT GGCGCGTCGC
GTTGCCGAGG CCGTCGAACG CCAACTGGCA GAACTGCCGC GTGCCGAAAC CGCCCGTCAG
GCACTGAGCG CCAGCCGCCT GATCGTGACC AACGATTTAG CGCAGTGCGT AGCGATTTCC
AACCAGTACG GCCCGGAGCA CCTGATCATT CAGACCCGCA ACGCCCGCGA ACTGGTCGAT
AGCATCACCA GCGCCGGTTC GGTATTTCTT GGTGACTGGT CACCGGAATC CGCAGGTGAT
TACGCCTCCG GCACCAACCA CGTTCTGCCG ACTTACGGTT ACACCGCCAC CTGTTCCAGC
CTCGGGCTGG CGGATTTCCA GAAGCGTATG ACCGTGCAGG AACTGTCGAA AGAAGGCTTC
TCCGCGCTGG CTTCAACCAT TGAAACATTG GCCGCCGCCG AGCGCCTGAC CGCCCATAAA
AATGCCGTTA CTTTGCGTGT TAACGCCCTT AAGGAGCAAG CATGA
|
|---|
| Protein sequence | MSFNTIIDWN SCTAEQQRQL LMRPAISASE SITRTVNDIL DNVKARGDDA LREYSAKFDK
TTVTALKVSA EEIAAASERL SDELKQAMAV AVKNIETFHT AQKLPPVDVE TQPGVRCQQV
TRPVASVGLY IPGGSAPLFS TVLMLATPAR IAGCKKVVLC SPPPIADEIL YAAQLCGVQD
VFNVGGAQAI AALAFGTESV PKVDKIFGPG NAFVTEAKRQ VSQRLDGAAI DMPAGPSEVL
VIADSGATPD FVASDLLSQA EHGPDSQVIL LTPAADMARR VAEAVERQLA ELPRAETARQ
ALSASRLIVT NDLAQCVAIS NQYGPEHLII QTRNARELVD SITSAGSVFL GDWSPESAGD
YASGTNHVLP TYGYTATCSS LGLADFQKRM TVQELSKEGF SALASTIETL AAAERLTAHK
NAVTLRVNAL KEQA
|
|---|
| |