Gene EcolC_1616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1616 
Symbol 
ID6067233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1798149 
End bp1798760 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content54% 
IMG OID641601031 
Productbifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein 
Protein accessionYP_001724601 
Protein GI170019647 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0139] Phosphoribosyl-AMP cyclohydrolase
[COG0140] Phosphoribosyl-ATP pyrophosphohydrolase 
TIGRFAM ID[TIGR03188] phosphoribosyl-ATP pyrophosphohydrolase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAACAG AACAACAACG TCGCGAACTG GACTGGGAAA AAACCGACGG ACTTATGCCG 
GTGATTGTGC AACACGCGGT ATCCGGTGAA GTGTTAATGC TGGGCTATAT GAACCCGCAA
GCCCTGGACA AAACCATCGA AAGCGGCAAA GTCACCTTCT TCTCGCGCAC TAAACAGCGA
CTGTGGACCA AAGGCGAAAC GTCGGGCAAT TTCCTCAACG TAGTAAATAT TACGCCGGAC
TGCGACAACG ACACGTTACT GTTGCTGGCG AATCCCATCG GCCCGACCTG CCACAAAGGC
ACCAGCAGCT GCTTCGGCGA CACCGCTCAC CAGTGGCTGT TCCTGTATCA ACTGGAACAA
CTGCTCGCCG AACGTAAATC TGCCGACCCG GAAACCTCCT ATACCGCCAA ACTGTATGCC
AGCGGCACCA AGCGCATTGC GCAGAAAGTG GGCGAAGAAG GCGTGGAAAC CGCACTGGCA
GCGACAGTAC ATGACCGCTT TGAGCTGACC AACGAGGCAT CTGATTTGAT GTATCACCTG
CTGGTGCTAT TGCAGGATCA GGATCTGGAC TTAACGACGG TGATTGAGAA CCTGCGTAAA
CGGCATCAGT GA
 
Protein sequence
MLTEQQRREL DWEKTDGLMP VIVQHAVSGE VLMLGYMNPQ ALDKTIESGK VTFFSRTKQR 
LWTKGETSGN FLNVVNITPD CDNDTLLLLA NPIGPTCHKG TSSCFGDTAH QWLFLYQLEQ
LLAERKSADP ETSYTAKLYA SGTKRIAQKV GEEGVETALA ATVHDRFELT NEASDLMYHL
LVLLQDQDLD LTTVIENLRK RHQ