Gene EcolC_1613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1613 
Symbol 
ID6067000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1794104 
End bp1795510 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content50% 
IMG OID641601028 
Product6-phosphogluconate dehydrogenase 
Protein accessionYP_001724598 
Protein GI170019644 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0362] 6-phosphogluconate dehydrogenase 
TIGRFAM ID[TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAGC AACAGATCGG CGTAGTCGGT ATGGCAGTGA TGGGGCGCAA CCTAGCGCTC 
AATATCGAAA GCCGTGGTTA TACCGTCTCT ATTTTCAACC GCTCCCGTGA GAAGACGGAA
GAAGTGATTG CCGAAAATCC AGGCAAGAAA CTGGTTCCTT ACTATACGGT GAAAGAGTTT
GTTGAATCTC TGGAAACGCC TCGTCGCATC CTGTTAATGG TGAAAGCAGG TGCAGGCACG
GATGCTGCTA TTGATTCTCT CAAGCCATAC CTCGATAAAG GCGACATCAT CATTGATGGT
GGTAACACCT TCTTCCAGGA CACCATCCGT CGTAACCGTG AGCTTTCTGC AGAAGGCTTT
AACTTCATCG GTACCGGTGT TTCCGGAGGC GAAGAAGGTG CGCTGAAAGG TCCTTCCATT
ATGCCTGGCG GGCAGAAAGA AGCCTATGAA CTGGTTGCTC CGATCCTGAC CAAAATCGCC
GCCGTTGCTG AAGATGGCCA ACCATGCGTT ACCTATATCG GTACCGATGG CGCAGGTCAC
TATGTGAAAA TGGTTCACAA TGGTATTGAA TACGGTGATA TGCAGCTGAT TGCTGAAGCC
TATTCTCTGC TAAAAGGTGG CCTGAACCTC ACCAACGAAG AGTTGGCGCA GACCTTTACC
GAGTGGAATA ACGGTGAACT GAGCAGCTAC CTGATCGACA TCACCAAAGA TATCTTCACC
AAAAAAGATG AAGACGGTAA CTACCTGGTT GATGTGATTC TGGATGAAGC TGCAAACAAA
GGTACCGGTA AATGGACCAG CCAGAGTGCG CTGGATCTCG GCGAACCGCT GTCGCTGATT
ACCGAGTCTG TGTTTGCACG TTATATCTCT TCTCTGAAAG ATCAGCGTGT TGCCGCATCT
AAAGTTCTCT CTGGCCCGCA AGCGCAGCCA GCAGGCAACA AAGCTGAGTT TATCGAGAAA
GTTCGTCGTG CGCTGTATCT GGGCAAAATC ATTTCTTATG CTCAGGGCTT CTCTCAGTTG
CGTGCTGCGT CTGAAGAATA CAACTGGGAT CTGAACTACG GCGAAATCGC GAAGATTTTC
CGTGCTGGCT GCATCATCCG TGCGCAGTTC CTGCAGAAAA TTACCGATGC TTATGCCGAA
AATCCGCAGA TCGCTAACCT GCTGTTGGCT CCGTACTTCA AGCAAATTGC CGATGACTAC
CAGCAGGCGC TGCGTGATGT CGTTGCTTAT GCAGTACAGA ACGGTATCCC GGTTCCTACC
TTCGCCGCTG CGGTTGCTTA TTATGATAGC TACCGTGCCG CTGTTTTGCC TGCGAACCTG
ATCCAGGCAC AGCGTGACTA TTTCGGTGCG CATACTTATA AGCGCATTGA TAAAGAAGGT
GTGTTCCATA CTGAATGGCT GGATTAA
 
Protein sequence
MSKQQIGVVG MAVMGRNLAL NIESRGYTVS IFNRSREKTE EVIAENPGKK LVPYYTVKEF 
VESLETPRRI LLMVKAGAGT DAAIDSLKPY LDKGDIIIDG GNTFFQDTIR RNRELSAEGF
NFIGTGVSGG EEGALKGPSI MPGGQKEAYE LVAPILTKIA AVAEDGQPCV TYIGTDGAGH
YVKMVHNGIE YGDMQLIAEA YSLLKGGLNL TNEELAQTFT EWNNGELSSY LIDITKDIFT
KKDEDGNYLV DVILDEAANK GTGKWTSQSA LDLGEPLSLI TESVFARYIS SLKDQRVAAS
KVLSGPQAQP AGNKAEFIEK VRRALYLGKI ISYAQGFSQL RAASEEYNWD LNYGEIAKIF
RAGCIIRAQF LQKITDAYAE NPQIANLLLA PYFKQIADDY QQALRDVVAY AVQNGIPVPT
FAAAVAYYDS YRAAVLPANL IQAQRDYFGA HTYKRIDKEG VFHTEWLD