Gene EcolC_1600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1600 
Symbol 
ID6066055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1780323 
End bp1781216 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content51% 
IMG OID641601016 
ProductUTP--glucose-1-phosphate uridylyltransferase subunit GalF 
Protein accessionYP_001724586 
Protein GI170019632 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1210] UDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01099] UTP-glucose-1-phosphate uridylyltransferase
[TIGR01105] UTP-glucose-1-phosphate uridylyltransferase, non-catalytic GalF subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.209191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAATT TAAAAGCAGT TATACCGGTA GCAGGTCTTG GGATGCATAT GTTGCCTGCC 
ACTAAGGCGA TTCCCAAAGA GATGCTACCG ATCGTCGACA AGCCAATGAT TCAGTACATT
GTTGACGAGA TTGTGGCTGC AGGGATCAAA GAAATCCTCC TGGTAACTCA CGCGTCCAAG
AATGCGGTCG AAAACCACTT CGACACCTCT TATGAATTAG AATCTCTCCT TGAACAGCGC
GTGAAGCGTC AACTGCTGGC GGAAGTGCAG TCTATCTGTC CGCCTGGCGT GACCATTATG
AACGTGCGTC AGGGCGAACC TTTAGGTTTA GGCCACTCCA TTTTATGTGC ACGACCCGCC
ATTGGCGACA ACCCATTTGT CGTGGTACTG CCAGACGTAG TGATCGACGA CGCCAGCGCC
GACCCGCTGC GCTACAACCT TGCTGCCATG ATTGCGCGCT TCAATGAAAC GGGCCGTAGC
CAGGTGCTGG CAAAACGTAT GCCGGGTGAC CTCTCTGAAT ACTCCGTCAT TCAGACCAAA
GAACCGCTGG ACCGTGAAGG CAAAGTCAGC CGCATTGTTG AATTCATCGA AAAACCGGAT
CAGCCACAGA CGCTGGACTC AGACATCATG GCCGTTGGTC GCTATGTGCT TTCTGCCGAT
ATTTGGCCGG AACTTGAACG CACTCAACCT GGTGCATGGG GGCGTATTCA GCTGACTGAT
GCCATTGCTG AACTGGCGAA AAAACAGTCC GTTGATGCAA TGCTGATGAC TGGTGAAAGC
TACGACTGCG GTAAAAAAAT GGGTTATATG CAGGCGTTCG TGAAGTATGG ACTACGCAAC
CTGAAAGAAG GGGCGAAGTT CCGTAAAGGG ATTGAGAAGC TGTTAAGCGA ATAA
 
Protein sequence
MTNLKAVIPV AGLGMHMLPA TKAIPKEMLP IVDKPMIQYI VDEIVAAGIK EILLVTHASK 
NAVENHFDTS YELESLLEQR VKRQLLAEVQ SICPPGVTIM NVRQGEPLGL GHSILCARPA
IGDNPFVVVL PDVVIDDASA DPLRYNLAAM IARFNETGRS QVLAKRMPGD LSEYSVIQTK
EPLDREGKVS RIVEFIEKPD QPQTLDSDIM AVGRYVLSAD IWPELERTQP GAWGRIQLTD
AIAELAKKQS VDAMLMTGES YDCGKKMGYM QAFVKYGLRN LKEGAKFRKG IEKLLSE