Gene EcolC_1587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1587 
Symbol 
ID6066314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1764453 
End bp1765001 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content48% 
IMG OID641601003 
Productputative colanic acid biosynthesis acetyltransferase WcaF 
Protein accessionYP_001724573 
Protein GI170019619 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGATT TAAGCGGTTT CTCGGTGCCG AAAGGGTTCC GGGGCGGCAA CGCTATTAAA 
GTGCAATTAT GGTGGGCAGT ACAGGCAACA ATATTTGCCT GGTCGCCACA AGTATTGTAT
CGCTGGCGGG CATTTTTATT ACGTTTATTC GGCGCAAAAA TAGGAAAAAA CGTAGTTATT
CGTCCGTCAG TAAAAATTAC CTATCCGTGG AAATTAACCT TAGGTGATTA CGCGTGGGTC
GGCGATGACG TCAATTTATA TACCCTCGGT GAAATAACCA TTGGCGCACA TTCGGTGATA
TCGCAAAAAA GTTATTTATG CACCGGTAGC CACGACCATG CAAGTCAACA TTTCACCATT
AACGCCACGC CTATTGTGAT TGGCGAGAAA TGCTGGCTGG CAACCGATGT CTTTGTTGCC
CCAGGCGTCA CAATCGGCGA CGGCACCGTC GTGGGTGCAC GAAGCAGTGT TTTTAAATCG
CTTCCGGCAA ATGTGGTTTG CCGGGGGAAT CCCGCAGTGG TGATACGCGA ACGCGTTGAA
ACTGAATAA
 
Protein sequence
MQDLSGFSVP KGFRGGNAIK VQLWWAVQAT IFAWSPQVLY RWRAFLLRLF GAKIGKNVVI 
RPSVKITYPW KLTLGDYAWV GDDVNLYTLG EITIGAHSVI SQKSYLCTGS HDHASQHFTI
NATPIVIGEK CWLATDVFVA PGVTIGDGTV VGARSSVFKS LPANVVCRGN PAVVIRERVE
TE