Gene EcolC_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1580 
Symbol 
ID6065125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1757118 
End bp1757561 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content54% 
IMG OID641600996 
Producttyrosine phosphatase 
Protein accessionYP_001724566 
Protein GI170019612 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.956744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAACA ACATATTAGT TGTCTGTGTC GGCAATATTT GCCGTTCCCC GACGGCGGAA 
CGCTTACTGC AACGTTATCA CCCGGAACTG AAAGTGGAGT CCGCTGGACT CGGCGCGCTG
GTCGGTAAGG GCGCTGATCC TACCGCTATC AGCGTCGCCG CAGAACATCA ACTGTCTCTG
GAAGGCCACT GTGCACGACA AATCAGCCGC CGCCTGTGTC GCAACTATGA CCTGATTTTG
ACCATGGAAA AGCGCCATAT CGAACGCTTA TGCGAGATGG CACCTGAGAT GCGCGGCAAA
GTGATGCTGT TTGGTCACTG GGATAACGAA TGTGAAATCC CCGATCCGTA TCGCAAAAGC
CGGGAAACGT TTGCAGCGGT GTACACATTA CTTGAACGGT CTGCCCGCCA GTGGGCGCAG
GCATTGAACG CAGAGCAGGT ATAA
 
Protein sequence
MFNNILVVCV GNICRSPTAE RLLQRYHPEL KVESAGLGAL VGKGADPTAI SVAAEHQLSL 
EGHCARQISR RLCRNYDLIL TMEKRHIERL CEMAPEMRGK VMLFGHWDNE CEIPDPYRKS
RETFAAVYTL LERSARQWAQ ALNAEQV