Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1564 |
Symbol | |
ID | 6065361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 1730226 |
End bp | 1731641 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641600980 |
Product | multidrug efflux system protein MdtE |
Protein accession | YP_001724550 |
Protein GI | 170019596 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.886181 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.734188 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGATC TTCCCGACAG CACCCGTTGG CAATTGTGGA TTGTGGCTTT CGGCTTCTTT ATGCAGTCGC TGGACACCAC CATCGTAAAC ACCGCCCTTC CCTCAATGGC GCAAAGCCTC GGGGAAAGTC CGTTGCATAT GCACATGGTC ATTGTCTCTT ATGTGCTGAC CGTGGCGGTG ATGCTGCCCG CCAGCGGCTG GCTGGCGGAC AAAGTCGGCG TGCGCAATAT TTTCTTTACC GCCATCGTGC TGTTTACTCT CGGTTCACTG TTTTGCGCGC TTTCCGGCAC GCTGAACGAA CTGTTGCTGG CACGCGCGTT ACAGGGCGTT GGCGGCGCGA TGATGGTGCC GGTCGGCAGA TTGACGGTGA TGAAAATCGT ACCGCGCGAG CAATATATGG CGGCGATGAC CTTTGTCACG TTACCCGGTC AGGTCGGTCC GCTGCTCGGT CCGGCGCTCG GCGGTCTGCT GGTGGAGTAC GCATCGTGGC ACTGGATCTT TTTGATCAAC ATTCCGGTGG GGATTATCGG TGCGATCGCC ACATTGCTGT TAATGCCAAA CTACACCATG CAGACGCGGC GCTTTGATCT CTCCGGATTT TTATTGCTGG CGGTTGGCAT GGCGGTATTA ACCCTGGCGC TGGACGGCAG TAAAGGTACA GGTTTATCGC CGCTGACGAT TGCAGGCCTG GTCGCAGTTG GCGTGGTGGC ACTGGTGCTT TATCTGCTGC ACGCCAGAAA TAACAACCGT GCCCTGTTCA GTCTGAAACT GTTCCGTACT CGTACCTTTT CGCTGGGCCT GGCGGGGAGC TTTGCCGGAC GTATTGGCAG TGGCATGTTG CCCTTTATGA CACCGGTTTT CCTGCAAATT GGCCTCGGTT TCTCGCCGTT TCATGCCGGA CTGATGATGA TCCCGATGGT GCTTGGCAGC ATGGGAATGA AGCGAATTGT GGTACAGGTG GTGAATCGCT TTGGTTATCG TCGGGTACTG GTAGCGACCA CGCTGGGTCT GTCGCTGGTC ACCCTGTTGT TTATGACTAC CGCCCTGCTG GGCTGGTACT ACGTTTTGCC GTTCGTCCTG TTTTTACAAG GGATGGTCAA CTCGACGCGT TTCTCCTCCA TGAACACCCT GACGCTGAAA GATCTCCCGG ACAATCTGGC GAGCAGCGGC AACAGCCTGC TGTCGATGAT TATGCAATTG TCGATGAGTA TCGGCGTCAC TATCGCCGGG CTGTTGCTGG GACTTTTTGG TTCACAGCAT GTCAGCGTCG ACAGCGGCAC CACACAAACC GTCTTTATGT ACACCTGGCT TAGCATGGCG TTGATCATCG CCCTTCCGGC GTTCATCTTT GCCAGAGTGC CGAACGATAC GCATCAAAAT GTAGCTATTT CGCGGCGAAA AAGGAGCGCG CAATGA
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Protein sequence | MTDLPDSTRW QLWIVAFGFF MQSLDTTIVN TALPSMAQSL GESPLHMHMV IVSYVLTVAV MLPASGWLAD KVGVRNIFFT AIVLFTLGSL FCALSGTLNE LLLARALQGV GGAMMVPVGR LTVMKIVPRE QYMAAMTFVT LPGQVGPLLG PALGGLLVEY ASWHWIFLIN IPVGIIGAIA TLLLMPNYTM QTRRFDLSGF LLLAVGMAVL TLALDGSKGT GLSPLTIAGL VAVGVVALVL YLLHARNNNR ALFSLKLFRT RTFSLGLAGS FAGRIGSGML PFMTPVFLQI GLGFSPFHAG LMMIPMVLGS MGMKRIVVQV VNRFGYRRVL VATTLGLSLV TLLFMTTALL GWYYVLPFVL FLQGMVNSTR FSSMNTLTLK DLPDNLASSG NSLLSMIMQL SMSIGVTIAG LLLGLFGSQH VSVDSGTTQT VFMYTWLSMA LIIALPAFIF ARVPNDTHQN VAISRRKRSA Q
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