Gene EcolC_1562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1562 
Symbol 
ID6065054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1728107 
End bp1728829 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content54% 
IMG OID641600978 
ProductDNA-binding transcriptional regulator BaeR 
Protein accessionYP_001724548 
Protein GI170019594 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.279171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.454228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGT TACCAATCGA CGAAAACACA CCGCGTATTT TGATCGTGGA AGATGAACCG 
AAGCTGGGGC AGTTGCTCAT TGATTATCTG CGTGCTGCGA GCTATGCGCC GACGCTTATC
AGCCACGGCG ATCAGGTACT GCCGTATGTG CGCCAGACAC CACCGGATCT GATCCTGTTA
GATCTGATGC TCCCTGGCAC CGATGGCCTG ACGCTGTGCC GGGAAATTCG TCGTTTTTCT
GACATTCCGA TCGTGATGGT GACGGCAAAA ATCGAAGAGA CCGATCGCCT GCTGGGGCTG
GAGATTGGCG CAGATGATTA TATCTGTAAG CCGTACAGCC CACGGGAAGT GGTAGCGCGC
GTCAAAACCA TTTTGCGCCG TTGCAAACCG CAGCGCGAGT TGCAGCAACA GGATGCTGAA
AGCCCGTTGA TTATCGACGA AGGTCGTTTT CAGGCTTCAT GGCGCGGTAA AATGCTTGAC
CTGACGCCTG CGGAATTTCG TCTGCTGAAA ACGCTCTCTC ACGAACCAGG AAAAGTGTTC
TCCCGCGAGC AATTGCTCAA TCATCTTTAT GACGACTACC GCGTAGTAAC CGACCGCACC
ATCGACAGCC ACATTAAAAA CCTGCGCCGC AAGCTGGAAT CTCTCGACGC CGAACAGTCA
TTTATCCGCG CCGTTTATGG CGTCGGTTAC CGCTGGGAAG CCGACGCCTG CCGCATCGTT
TAG
 
Protein sequence
MTELPIDENT PRILIVEDEP KLGQLLIDYL RAASYAPTLI SHGDQVLPYV RQTPPDLILL 
DLMLPGTDGL TLCREIRRFS DIPIVMVTAK IEETDRLLGL EIGADDYICK PYSPREVVAR
VKTILRRCKP QRELQQQDAE SPLIIDEGRF QASWRGKMLD LTPAEFRLLK TLSHEPGKVF
SREQLLNHLY DDYRVVTDRT IDSHIKNLRR KLESLDAEQS FIRAVYGVGY RWEADACRIV