Gene EcolC_1556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1556 
Symbol 
ID6067349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1722122 
End bp1723162 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content49% 
IMG OID641600972 
Productgalactitol-1-phosphate dehydrogenase 
Protein accessionYP_001724542 
Protein GI170019588 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAG TGGTGAATGA TACTGATGGT ATCGTGCGCG TTGCAGAAAG CGTCATTCCT 
GAAATTAAAC ATCAGGATGA GGTGCGGGTA AAAATTGCCA GCTCGGGCTT ATGTGGTTCC
GATTTACCCA GGATATTTAA AAATGGTGCA CATTATTATC CAATAACGTT AGGCCATGAA
TTTAGCGGCT ATATTGATGC GGTGGGATCC GGTGTTGATG ATTTACACCC TGGCGATGCG
GTTGCCTGTG TGCCGTTATT ACCCTGTTTT ACTTGTCCAG AGTGTCTGAA AGGGTTTTAT
TCCCAGTGCG CAAAATATGA TTTTATTGGC TCGCGGCGTG ATGGTGGATT TGCTGAATAT
ATTGTCGTTA AGCGAAAAAA TGTCTTTGCT CTACCCACGG ATATGCCTAT TGAGGATGGG
GCTTTTATTG AGCCGATTAC CGTTGGTCTG CATGCTTTTC ATTTAGCGCA AGGTTGTGAG
AATAAAAACG TTATTATTAT TGGTGCCGGA ACCATTGGCC TGCTGGCCAT TCAGTGCGCT
GTCGCGCTGG GAGCAAAGAG TGTGACGGCG ATCGACATTA GTTCAGAAAA ACTGGCACTG
GCAAAATCTT TCGGTGCGAT GCAAACATTT AACAGTAGCG AAATGAGCGC GCCGCAAATG
CAGAGCGTTT TACGCGAACT GCGCTTTAAT CAGCTTATCC TCGAGACGGC TGGCGTACCG
CAAACTGTCG AACTGGCGGT AGAGATTGCC GGTCCTCATG CCCAACTGGC GCTGGTGGGC
ACGTTGCATC AGGATCTGCA TTTAACATCG GCAACGTTTG GCAAAATATT GCGTAAAGAG
CTGACGGTTA TCGGCAGTTG GATGAACTAC TCCAGCCCTT GGCCGGGGCA GGAGTGGGAA
ACGGCGAGCC GGTTGCTGAC AGAACGTAAG TTAAGCCTGG AGCCATTAAT CGCTCACCGT
GGAAGCTTTG AAAGCTTCGC CCAGGCGGTG CGTGACATCG CTCGTAATGC TATGCCGGGC
AAAGTGTTGC TCATTCCCTG A
 
Protein sequence
MKSVVNDTDG IVRVAESVIP EIKHQDEVRV KIASSGLCGS DLPRIFKNGA HYYPITLGHE 
FSGYIDAVGS GVDDLHPGDA VACVPLLPCF TCPECLKGFY SQCAKYDFIG SRRDGGFAEY
IVVKRKNVFA LPTDMPIEDG AFIEPITVGL HAFHLAQGCE NKNVIIIGAG TIGLLAIQCA
VALGAKSVTA IDISSEKLAL AKSFGAMQTF NSSEMSAPQM QSVLRELRFN QLILETAGVP
QTVELAVEIA GPHAQLALVG TLHQDLHLTS ATFGKILRKE LTVIGSWMNY SSPWPGQEWE
TASRLLTERK LSLEPLIAHR GSFESFAQAV RDIARNAMPG KVLLIP