Gene EcolC_1554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1554 
Symbol 
ID6065275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1720431 
End bp1720715 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content42% 
IMG OID641600970 
ProductPTS system galactitol-specific transporter subunit IIB 
Protein accessionYP_001724540 
Protein GI170019586 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3414] Phosphotransferase system, galactitol-specific IIB component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCA AGATTATTGT CGCTTGCGGA GGCGCGGTTG CGACCTCTAC GATGGCGGCG 
GAAGAAATTA AAGAGTTGTG TCAGAATCAT AATATTCCTG TTGAATTAAT CCAGTGTCGG
GTTAATGAAA TAGAAACCTA TATGGATGGT GTGCATTTGA TATGCACCAC TGCCAAAGTG
GATCGTAGTT TTGGCGATAT TCCGTTAGTT CACGGCATGC CTTTTATTTC TGGTATCGGT
ATCGAAGCAT TACAAAATAA AATTCTGACT ATCTTACAGG GGTGA
 
Protein sequence
MKRKIIVACG GAVATSTMAA EEIKELCQNH NIPVELIQCR VNEIETYMDG VHLICTTAKV 
DRSFGDIPLV HGMPFISGIG IEALQNKILT ILQG