Gene EcolC_1540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1540 
Symbol 
ID6065716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1707699 
End bp1708037 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content50% 
IMG OID641600957 
Producthypothetical protein 
Protein accessionYP_001724527 
Protein GI170019573 
COG category[S] Function unknown 
COG ID[COG5455] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTA AAAATAAGAT GTTGCTGGGT GCGCTTTTGC TGGTTACCAG TGCCGCCTGG 
GCCGCACCAG CCACCGCGGG TTCGACCAAT ACCTCGGGAA TTTCTAAGTA TGAGTTAAGT
AGTTTCATTG CTGACTTTAA GCATTTCAAA CCAGGGGACA CCGTACCAGA AATGTACCGT
ACCGATGAGT ACAACATTAA GCAGTGGCAG TTGCGTAACC TGCCCGCGCC TGATGCCGGG
ACGCACTGGA CCTATATGGG TGGCGCGTAC GTGTTGATCA GCGACACCGA CGGTAAAATC
ATTAAAGCCT ACGACGGTGA GATTTTTTAT CATCGCTAA
 
Protein sequence
MTIKNKMLLG ALLLVTSAAW AAPATAGSTN TSGISKYELS SFIADFKHFK PGDTVPEMYR 
TDEYNIKQWQ LRNLPAPDAG THWTYMGGAY VLISDTDGKI IKAYDGEIFY HR