Gene EcolC_1520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1520 
Symbol 
ID6066931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1679397 
End bp1680128 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content53% 
IMG OID641600939 
ProductMerR family transcriptional regulator 
Protein accessionYP_001724509 
Protein GI170019555 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTTT ACACAATTGG TGAAGTGGCG TTGCTTTGTG ATATTAATCC TGTCACGTTA 
CGCGCGTGGC AGAGGCGTTA CGGATTGCTG AAACCGCAAC GGACAGACGG CGGTCATCGG
CTGTTCAACG ATGCCGATAT TGACCGGATC CGCGAGATCA AACGCTGGAT CGACAACGGC
GTGCAGGTCA GCAAAGTTAA AATGCTGCTC AGTAATGAAA ATGTTGATGT GCAGAACGGC
TGGCGCGATC AGCAAGAAAC ATTACTGACT TACCTGCAAA GCGGCAATCT ACATAGCCTG
CGAACGTGGA TCAAAGAGCG CGGTCAGGAT TACCCCGCCC AGACACTCAC CACACATCTG
TTTATTCCTC TGCGCCGACG GCTTCAGTGC CAACAACCGA CTCTCCAGGC GCTGCTGGCG
ATCCTCGACG GCGTACTGAT CAACTACATC GCCATTTGTC TGGCTTCGGC ACGTAAAAAA
CAGGGTAAAG ATGCGCTGGT GGTTGGCTGG AATATTCAGG ATACCACCCG TCTGTGGCTG
GAGGGCTGGA TTGCCAGTCA ACAAGGATGG CGCATTGATG TCCTCGCCCA CTCGCTCAAT
CAACTACGCC CTGAACTATT CGAAGGCCGT ACATTGCTGG TGTGGTGCGG TGAAAATCGA
ACCTCCGCCC AACAGCAGCA ACTCACCAGT TGGCAAGAAC AAGGCCATGA TATTTTCCCA
CTCGGCATTT AA
 
Protein sequence
MALYTIGEVA LLCDINPVTL RAWQRRYGLL KPQRTDGGHR LFNDADIDRI REIKRWIDNG 
VQVSKVKMLL SNENVDVQNG WRDQQETLLT YLQSGNLHSL RTWIKERGQD YPAQTLTTHL
FIPLRRRLQC QQPTLQALLA ILDGVLINYI AICLASARKK QGKDALVVGW NIQDTTRLWL
EGWIASQQGW RIDVLAHSLN QLRPELFEGR TLLVWCGENR TSAQQQQLTS WQEQGHDIFP
LGI