| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1517 |
|---|
| Symbol | |
|---|
| ID | 6066963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 1676437 |
|---|
| End bp | 1677594 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641600936 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001724506 |
|---|
| Protein GI | 170019552 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.89368 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTTATC TACGTATTAA TCCTGTTCTG GCGCTGCTGC TGTTGCTGAC GGCAATCGCA
GCGGCGCTGC CGTTTATCAG TTACGCGCCT AATCGTTTAG TCTCGGGTGA AGGGCGTCAT
CTCTGGCAAC TGTGGCCGCA AACGATCTGG ATGCTGGTGG GCGTTGGTTG CGCCTGGCTG
ACAGCCTGTT TTATTCCCGC TAAAAAAGGC AGCATTTTTG CACTCATTCT GGCGCAATTC
GTCTTCGTAT TGCTGGTGTG GGGAGCAGGA AAGGCGGCGA CCCAACTGGC GCAAAATGGC
AGTGCGCTGG CGCGTACCAG CCTCGGCAGT GGTTTCTGGC TGGCTGCGGC GCTGACATTG
CTGGCCTGTA GCGATGCCAT CCGCCGAATC TCCACGCATC CGCTGTGGCG CTGGTTGTTG
CATATGCAGA TTGCCATTAT TCCGCTGTGG TTGCTGTACT CCGGCACGCT TAACGATCTC
TCACTAATGA AAGAATACGC CAACCGTCAG GATGTGTTTG ACGACGCGCT GGCACAGCAT
TTGACGTTGC TGTTTGGTGC GGTGCTGCCT GCGTTAGTGA TTGGTGTGCC GTTGGGCATC
TGGTGCTACT TTTCCACTGC GCGGCAGGGG GCAATTTTTT CTCTGCTCAA TGTCATTCAG
ACCGTGCCTT CGGTGGCGCT CTTTGGCCTG TTGATTGCGC CGCTTGCCGC GCTGGTTACG
GCCTTTCCGT GGCTGGGGAA GCTCGGCATA GCAGGAACCG GAATGACACC CGCACTGATT
GCGCTGGTGC TCTATGCCTT GCTGCCGCTG GTGCGCGGCG TGGTAGTCGG TTTGAACCAG
ATCCCGCGCG ATGTGCTGGA GAGCGCCAGA GCGATGGGGA TGAGCGGGGC GCAGCGATTC
CTGCATGTTC AGTTACCACT GGCGTTACCG GTATTTCTGC GCAGCCTGCG GGTGGTGATG
GTGCAAACTG TAGGTATGGC GGTGATTGCG GCGTTAATCG GCGCAGGCGG TTTTGGTGCG
CTGGTTTTCC AGGGGCTGCT AAGCAGCGCC ATTGATTTAG TGTTGCTGGG GGTGATCCCG
GTAATTGTTC TGGCGGTGCT TACCGACGCG CTGTTCGATT TGCTTATCGC ACTGCTGAAG
GTGAAACGTA ATGATTGA
|
|---|
| Protein sequence | MTYLRINPVL ALLLLLTAIA AALPFISYAP NRLVSGEGRH LWQLWPQTIW MLVGVGCAWL
TACFIPAKKG SIFALILAQF VFVLLVWGAG KAATQLAQNG SALARTSLGS GFWLAAALTL
LACSDAIRRI STHPLWRWLL HMQIAIIPLW LLYSGTLNDL SLMKEYANRQ DVFDDALAQH
LTLLFGAVLP ALVIGVPLGI WCYFSTARQG AIFSLLNVIQ TVPSVALFGL LIAPLAALVT
AFPWLGKLGI AGTGMTPALI ALVLYALLPL VRGVVVGLNQ IPRDVLESAR AMGMSGAQRF
LHVQLPLALP VFLRSLRVVM VQTVGMAVIA ALIGAGGFGA LVFQGLLSSA IDLVLLGVIP
VIVLAVLTDA LFDLLIALLK VKRND
|
|---|
| |