Gene EcolC_1510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1510 
Symbol 
ID6067065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1667683 
End bp1668444 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content55% 
IMG OID641600929 
Productacetoin dehydrogenase 
Protein accessionYP_001724499 
Protein GI170019545 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGG TTGCGATTAT TACCGCCTCC GATTCGGGGA TCGGCAAAGA GTGCGCGTTA 
TTACTGGCGC AGCAGGGGTT TGATATTGGT ATTACCTGGA ACTCAGATGA AGAAGGGGCA
AAAGATACCG CGCGTGAGGT AGTTAGCCAC GGCGTACGTG CGGAGATCGT GCAGCTGGAT
CTCGGTAAAC TGCCAGAAGG TGCGCAGGCG CTGGAGAAAC TCATTCAACG GCTGGGGCGT
ATTGATGTGC TGGTGAATAA TGCGGGCGCA ATGACCAAAG CGCCGTTTCT TGATATGGCT
TTCGATGAGT GGCGCAAGAT TTTTACCGTT GATGTCGATG GTGCATTTTT ATGCTCACAA
ATTGCGGCCC GCCAGATGGT GAAACAAGGG CAGGGCGGTC GCATCATCAA CATTACGTCG
GTACATGAAC ATACGCCGCT GCCGGATGCC AGCGCCTACA CAGCCGCTAA ACATGCGCTC
GGTGGGTTAA CCAAAGCGAT GGCGCTGGAG CTGGTCAGGC ATAAGATTTT GGTGAACGCA
GTCGCGCCTG GGGCGATCGC CACGCCAATG AATGGCATGG ATGACAGCGA CGTGAAGCCC
GACGCGGAGC CTTCGATTCC TCTGCGGCGT TTTGGCGCAA CGCATGAGAT TGCCAGCCTG
GTAGCGTGGC TGTGCTCAGA GGGCGCAAAT TACACCACCG GGCAGTCGTT GATAGTGGAT
GGCGGCTTTA TGTTGGCGAA TCCGCAGTTC AACCCAGAAT AG
 
Protein sequence
MAQVAIITAS DSGIGKECAL LLAQQGFDIG ITWNSDEEGA KDTAREVVSH GVRAEIVQLD 
LGKLPEGAQA LEKLIQRLGR IDVLVNNAGA MTKAPFLDMA FDEWRKIFTV DVDGAFLCSQ
IAARQMVKQG QGGRIINITS VHEHTPLPDA SAYTAAKHAL GGLTKAMALE LVRHKILVNA
VAPGAIATPM NGMDDSDVKP DAEPSIPLRR FGATHEIASL VAWLCSEGAN YTTGQSLIVD
GGFMLANPQF NPE