Gene EcolC_1501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1501 
Symbol 
ID6067096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1658452 
End bp1659687 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content51% 
IMG OID641600920 
Productdihydropyrimidine dehydrogenase 
Protein accessionYP_001724490 
Protein GI170019536 
COG category[C] Energy production and conversion
[F] Nucleotide transport and metabolism 
COG ID[COG0167] Dihydroorotate dehydrogenase
[COG1146] Ferredoxin 
TIGRFAM ID[TIGR01037] dihydroorotate dehydrogenase (subfamily 1) family protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAACGA AAGATCTTTC GATTACTTTT TGCGGCGTGA AGTTTCCCAA CCCGTTCTGC 
CTCTCTTCTT CGCCGGTAGG CAACTGCTAT GAGATGTGTG CCAAAGCCTA CGACACAGGT
TGGGGCGGTG TGGTGTTTAA AACGATCGGC TTTTTTATCG CCAACGAAGT CTCGCCGCGT
TTTGATCATC TGGTGAAAGA AGATACCGGT TTTATCGGCT TCAAAAATAT GGAGCAGATT
GCCGAGCATC CGTTGGAAGA GAATCTGGCC GCCCTGCGTC GGCTGAAGGA AGATTACCCG
GACAAAGTAT TGATCGCTTC GATCATGGGG GAAAATGAGC AGCAATGGGA GGAGCTGGCG
CGCCTGGTGC AAGAAGTTGG CGCGGATATG ATCGAGTGTA ACTTCTCCTG TCCGCAAATG
ACGTCTCATG CGATGGGTAG CGATGTCGGG CAAAGCCCGG AGCTGGTAGA AAAATATTGT
CGGGCAGTTA AACGGGGTTC CACGCTGCCG ATGCTGGCGA AGATGACACC GAATATCGGT
GATATGTGCG AAGTGGCGCT GGCGGCGAAG CGCGGCGGCG CAGATGGCAT TGCGGCAATT
AACACCGTTA AATCCATCAC CAATATCGAT CTTAATCAGA AAATCGGTAT GCCGATCGTG
AACGGTAAAT CGAGTATTTC CGGATATTCC GGTAAAGCGG TAAAACCGAT CGCCCTGCGC
TTTATTCAGC AAATGCGCAC CCATCCAGAA CTGCGCGATT TCCCGATCAG CGGTATCGGC
GGCATTGAAA CCTGGGAAGA TGCGGCGGAG TTTTTATTGC TCGGCGCAGC AACGTTACAG
GTCACCACCG GCATTATGCA GTACGGCTAT CGGATAGTGG AAGATATGGC GAGCGGGTTG
TCGCATTATC TCGCCGATCA AGGGTTTGAT TCGTTGCAGG AGATGGTAGG TCTGGCGAAT
AACAATATTG TCCCGGCGGA AGATTTAGAC CGCAGTTATA TTGTCTATCC CCGTATCAAT
CTTGATAAAT GTGTTGGCTG TGGACGCTGT TATATTTCCT GTTACGACGG CGGTCACCAG
GCGATGGAAT GGAGCGAGAA AACCCGCACA CCGCATTGTA ATACCGAGAA ATGTGTGGGT
TGTCTGCTTT GTGGTCACGT CTGCCCGGTG GGTTGTATTG AGCTCGGGGA AGTGAAGTTT
AAGAAAGGCG AGAAAGAACA CCCGGTAACG TTGTAA
 
Protein sequence
MLTKDLSITF CGVKFPNPFC LSSSPVGNCY EMCAKAYDTG WGGVVFKTIG FFIANEVSPR 
FDHLVKEDTG FIGFKNMEQI AEHPLEENLA ALRRLKEDYP DKVLIASIMG ENEQQWEELA
RLVQEVGADM IECNFSCPQM TSHAMGSDVG QSPELVEKYC RAVKRGSTLP MLAKMTPNIG
DMCEVALAAK RGGADGIAAI NTVKSITNID LNQKIGMPIV NGKSSISGYS GKAVKPIALR
FIQQMRTHPE LRDFPISGIG GIETWEDAAE FLLLGAATLQ VTTGIMQYGY RIVEDMASGL
SHYLADQGFD SLQEMVGLAN NNIVPAEDLD RSYIVYPRIN LDKCVGCGRC YISCYDGGHQ
AMEWSEKTRT PHCNTEKCVG CLLCGHVCPV GCIELGEVKF KKGEKEHPVT L