| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1492 |
|---|
| Symbol | |
|---|
| ID | 6067124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 1646592 |
|---|
| End bp | 1648061 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641600911 |
|---|
| Product | lysine transporter |
|---|
| Protein accession | YP_001724481 |
|---|
| Protein GI | 170019527 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0833] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0314529 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTCCG AAACTAAAAC CACAGAAGCG CCGGGCTTAC GCCGTGAATT AAAGGCGCGT
CACCTGACGA TGATTGCCAT TGGCGGTTCC ATCGGTACAG GTCTTTTTGT TGCCTCTGGC
GCAACGATTT CTCAGGCAGG TCCGGGCGGG GCATTGCTCT CGTATATGCT GATTGGCCTG
ATGGTTTACT TCCTGATGAC CAGTCTCGGT GAACTGGCTG CATATATGCC GGTTTCCGGT
TCGTTTGCCA CTTACGGTCA GAACTATGTT GAAGAAGGCT TTGGCTTCGC GCTGGGCTGG
AACTACTGGT ACAACTGGGC GGTGACTATC GCCGTTGACC TGGTTGCAGC TCAGCTGGTC
ATGAGCTGGT GGTTCCCGGA TACACCGGGC TGGATCTGGA GTGCGTTGTT CCTCGGCGTT
ATCTTCCTGC TGAACTACAT CTCAGTTCGT GGCTTTGGTG AAGCGGAATA CTGGTTCTCA
CTGATCAAAG TCACGACAGT TATTGTCTTT ATCATCGTTG GCGTGCTGAT GATTATCGGT
ATCTTCAAAG GCGCGCAGCC TGCGGGCTGG AGCAACTGGA CAATCGGCGA AGCGCCGTTT
GCTGGTGGTT TTGCGGCGAT GATCGGCGTA GCTATGATTG TCGGCTTCTC TTTCCAGGGA
ACCGAGCTGA TCGGTATTGC TGCAGGCGAG TCCGAAGATC CGGCGAAAAA CATTCCACGC
GCGGTACGTC AGGTGTTCTG GCGAATCCTG TTGTTCTATG TGTTCGCGAT CCTGATTATC
AGCCTGATTA TTCCGTACAC CGATCCGAGC CTGCTGCGTA ACGATGTTAA AGACATCAGC
GTTAGTCCGT TCACCCTGGT GTTCCAGCAC GCGGGTCTGC TCTCTGCGGC GGCGGTGATG
AACGCAGTTA TTCTGACGGC GGTGCTGTCA GCGGGTAACT CCGGTATGTA TGCGTCTACT
CGTATGCTGT ACACCCTGGC GTGTGACGGT AAAGCGCCGC GCATTTTCGC TAAACTGTCG
CGTGGTGGCG TGCCGCGTAA TGCGCTGTAT GCGACGACGG TGATTGCCGG TCTGTGCTTC
CTGACCTCCA TGTTTGGCAA CCAGACGGTA TACCTGTGGC TGCTGAACAC CTCCGGGATG
ACGGGTTTTA TCGCCTGGCT GGGGATTGCC ATTAGCCACT ATCGCTTCCG TCGCGGTTAC
GTATTGCAGG GACACGACAT TAACGATCTG CCGTACCGTT CAGGTTTCTT CCCACTGGGG
CCGATCTTCG CATTCATTCT GTGTCTGATT ATCACTTTGG GCCAGAACTA CGAAGCGTTC
CTGAAAGATA CTATTGACTG GGGCGGCGTA GCGGCAACGT ATATTGGTAT CCCGCTGTTC
CTGATTATTT GGTTCGGCTA CAAGCTGATT AAAGGAACTC ACTTCGTACG CTACAGCGAA
ATGAAGTTCC CGCAGAACGA TAAGAAATAA
|
|---|
| Protein sequence | MVSETKTTEA PGLRRELKAR HLTMIAIGGS IGTGLFVASG ATISQAGPGG ALLSYMLIGL
MVYFLMTSLG ELAAYMPVSG SFATYGQNYV EEGFGFALGW NYWYNWAVTI AVDLVAAQLV
MSWWFPDTPG WIWSALFLGV IFLLNYISVR GFGEAEYWFS LIKVTTVIVF IIVGVLMIIG
IFKGAQPAGW SNWTIGEAPF AGGFAAMIGV AMIVGFSFQG TELIGIAAGE SEDPAKNIPR
AVRQVFWRIL LFYVFAILII SLIIPYTDPS LLRNDVKDIS VSPFTLVFQH AGLLSAAAVM
NAVILTAVLS AGNSGMYAST RMLYTLACDG KAPRIFAKLS RGGVPRNALY ATTVIAGLCF
LTSMFGNQTV YLWLLNTSGM TGFIAWLGIA ISHYRFRRGY VLQGHDINDL PYRSGFFPLG
PIFAFILCLI ITLGQNYEAF LKDTIDWGGV AATYIGIPLF LIIWFGYKLI KGTHFVRYSE
MKFPQNDKK
|
|---|
| |