Gene EcolC_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1488 
Symbol 
ID6067137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1642336 
End bp1643424 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content52% 
IMG OID641600907 
Producthypothetical protein 
Protein accessionYP_001724477 
Protein GI170019523 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000467798 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00751025 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATAACC GGGAAAAGGA GATCCTTGCA ATTTTACGGC GTAACCCGCT GATTCAGCAG 
AACGAAATTG CGGACATGCT GCAAATCAGT CGTTCGCGCG TTGCGGCGCA TATTATGGAT
TTAATGCGCA AAGGGCGGAT TAAAGGCAAA GGTTACATTC TCACCGAGCA GGAATACTGC
GTAGTGGTGG GGACAATCAA TATGGATATT CGCGGGATGG CGGATATCCG TTACCCGCAA
GCGGCTTCTC ATCCCGGTAC AATTCATTGC TCGGCGGGCG GCGTGGGACG CAACATCGCC
CACAATCTGG CGCTGTTAGG CCGTGACGTC CATTTGCTTT CAGTGATTGG CGATGACTTT
TATGGCGAAA TGCTCCTGGA AGAAACGCGC CGTGCCGGCG TGAATGTCTC CGGCTGCGTT
CGTTTGCATG GTCAAAGCAC ATCGACGTAT CTGGCAATTG CCAATCGAGA CGATCAAACC
GTGCTGGCGA TTAACGATAC CCATCTGCTG GAACAGTTGA CACCGCAACT ACTGAACGGG
TCGCGCGATT TACTTCGTCA TGCGGGCGTG GTACTGGCTG ATTGCAACCT GACAGCCGAG
GCGCTGGAAT GGGTCTTTAC CCTCGCTGAT GAAATCCCGG TGTTTGTCGA TACCGTTTCA
GAATTCAAAG CGGGCAAAAT CAAACACTGG CTGGCGCATA TTCACACCCT GAAACCCACT
TTACCGGAGC TGGAAATTTT ATGGGGACAG GCGATCACCA GCGATGCTGA CCGTAATGCC
GCAGTGAATG CATTGCATCA GCAAGGTGTT CAGCAACTGT TTGTTTATTT GCCCGATGAG
TCAGTTTATT GCAGCGAAAA GGATGGAGAA CAATTTTTGC TGACCGCGCC AGCGCATACG
ACAGTAGACA GTTTTGGTGC TGACGATGGT TTTATGGCGG GCCTGGTATA TAGCTTTCTT
GAAGGATACA GTTTCCGCGA CAGCGCCCGT TTTGCGGTAG CCTGCGCGGC AATTTCGCGC
GCCAGCGGCA GCTTAAACAA CCCTACCCTG TCTGCCGATA ACGCGCTTTC ATTAGTGCCA
ATGGTGTAA
 
Protein sequence
MNNREKEILA ILRRNPLIQQ NEIADMLQIS RSRVAAHIMD LMRKGRIKGK GYILTEQEYC 
VVVGTINMDI RGMADIRYPQ AASHPGTIHC SAGGVGRNIA HNLALLGRDV HLLSVIGDDF
YGEMLLEETR RAGVNVSGCV RLHGQSTSTY LAIANRDDQT VLAINDTHLL EQLTPQLLNG
SRDLLRHAGV VLADCNLTAE ALEWVFTLAD EIPVFVDTVS EFKAGKIKHW LAHIHTLKPT
LPELEILWGQ AITSDADRNA AVNALHQQGV QQLFVYLPDE SVYCSEKDGE QFLLTAPAHT
TVDSFGADDG FMAGLVYSFL EGYSFRDSAR FAVACAAISR ASGSLNNPTL SADNALSLVP
MV