Gene EcolC_1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1486 
SymbolrihB 
ID6067145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1639989 
End bp1640930 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content52% 
IMG OID641600906 
Productribonucleoside hydrolase 2 
Protein accessionYP_001724476 
Protein GI170019522 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1957] Inosine-uridine nucleoside N-ribohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0358178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000862517 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAAAGA GAAAAATTAT TCTGGATTGT GATCCGGGTC ATGATGATGC TATTGCAATG 
ATGATGGCAG CGAAACATCC GGCAATAGAT TTATTAGGCA TCACTATTGT AGCGGGTAAT
CAGACGCTTG ATAAAACATT AATTAATGGC CTGAATGTTT GCCAGAAACT GGAGATTAAT
GTTCCGGTTT ATGCGGGGAT GCCGCAACCC ATTATGCGTA AACAAATCGT TGCCGATAAT
ATTCACGGTG AAACCGGACT GGATGGCCCG GTATTCGAGC CGCTGACCCG CCAGGCAGAA
AGTACCCACG CGGTGAAATA CATCATTGAT ACCCTGATGG CAAGCGATGG CGATATCACT
CTGGTGCCGG TTGGTCCGCT TTCAAATATC GCGGTGGCAA TGCGTATGCA ACCCGCGATC
CTGCCCAAAA TCCGTGAAAT TGTGCTAATG GGCGGCGCTT ACGGTACAGG CAACTTCACG
CCATCTGCCG AGTTCAACAT CTTTGCTGAT CCGGAAGCAG CCCGCGTGGT GTTCACCTCC
GGCGTTCCAT TAGTGATGAT GGGCCTCGAT CTCACCAACC AGACCGTTTG CACCCCGGAC
GTGATTGCAC GGATGGAAAG GGCAGGCGGC CCTGCCGGAG AGCTGTTCAG CGACATCATG
AACTTCACTC TCAAAACGCA GTTCGAAAAC TACGGCCTGG CTGGCGGCCC GGTGCACGAC
GCCACCTGCA TCGGTTATCT GATTAACCCT GATGGCATTA AAACCCAGGA GATGTACGTC
GAAGTGGACG TCAACAGTGG CCCTTGCTAT GGGCGTACCG TCTGCGACGA GCTGGGCGTT
CTTGGCAAGC CCGCTAATAC CAAAGTCGGC ATCACTATTG ATACCGACTG GTTCTGGGGC
TTAGTCGAAG AGTGCGTGCG CGGCTACATC AAAACCCATT AA
 
Protein sequence
MEKRKIILDC DPGHDDAIAM MMAAKHPAID LLGITIVAGN QTLDKTLING LNVCQKLEIN 
VPVYAGMPQP IMRKQIVADN IHGETGLDGP VFEPLTRQAE STHAVKYIID TLMASDGDIT
LVPVGPLSNI AVAMRMQPAI LPKIREIVLM GGAYGTGNFT PSAEFNIFAD PEAARVVFTS
GVPLVMMGLD LTNQTVCTPD VIARMERAGG PAGELFSDIM NFTLKTQFEN YGLAGGPVHD
ATCIGYLINP DGIKTQEMYV EVDVNSGPCY GRTVCDELGV LGKPANTKVG ITIDTDWFWG
LVEECVRGYI KTH