Gene EcolC_1485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1485 
Symbol 
ID6067144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1639161 
End bp1639820 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content45% 
IMG OID641600905 
ProductDNA-binding transcriptional activator YeiL 
Protein accessionYP_001724475 
Protein GI170019521 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0399687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0009131 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGAAT CCGCGTTTAA GGATTGCTTT TTAACGGATG TTTCAGCCGA TACGCGGCTG 
TTTCATTTTT TAGCGCGTGA CTACATTGTG CAGGAAGGGC AACAGCCGTC CTGGCTGTTT
TATCTGACGC GAGGCCGCGC CAGGCTTTAC GCCACGCTTG CTAATGGTCG CGTGTCGCTG
ATCGATTTCT TTGCCGCCCC CTGTTTTATT GGTGAGATTG AGTTAATCGA CAAAGACCAT
GAACCGCGTG CGGTGCAGGC TATTGAAGAG TGTTGGTGCC TTGCGCTCTC TATGAAACAT
TACCGCCCGC TGTTATTAAA CGACACGCTA TTTTTACGAA AACTCTGCGT CACCTTAAGT
CATAAAAATT ATCGTAATAT TGTTTCTTTA ACTCAGAATC AATCATTTCC GTTAGTTAAT
CGCCTGGCAG CTTTTATATT ACTCTCGCAG GAAGGTGATC TTTATCACGA AAAGCATACG
CAAGCGGCAG AGTATTTAGG CGTTTCTTAT CGACATCTTT TATATGTTCT CGCGCAATTC
ATTCACGACG GTTTATTAAC TAAAAGCAAG AAAGGGTATC TCATTAAAAA CAGAAAGCAG
TTGTCAGGAC TGGCGCTGGA GATGGACCCG GAGAATAAAT TCTCCGGGAT GATGCAGTAA
 
Protein sequence
MSESAFKDCF LTDVSADTRL FHFLARDYIV QEGQQPSWLF YLTRGRARLY ATLANGRVSL 
IDFFAAPCFI GEIELIDKDH EPRAVQAIEE CWCLALSMKH YRPLLLNDTL FLRKLCVTLS
HKNYRNIVSL TQNQSFPLVN RLAAFILLSQ EGDLYHEKHT QAAEYLGVSY RHLLYVLAQF
IHDGLLTKSK KGYLIKNRKQ LSGLALEMDP ENKFSGMMQ